| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1915 |
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| Symbol | |
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| ID | 4028357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2174964 |
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| End bp | 2177825 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637967109 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_573966 |
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| Protein GI | 92114038 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA CTCGAAAATC CTCCCAACCC GCCGGCCAGG GCGGTCTCGG CATCAGCCGC
CGCCAATTCC TCCAGCGCAG CGGCGTGGCA ACCGGCGGTC TCGCCGCGGC CGGCTTCATG
GGCCATGGCA TGATGCAGGC GGCCAGTGCC AAGGAAAAGA CGGCCTATTC CGATGCCCCC
GTCGAAACCA AGCGCACCAT CTGCTCGCAC TGCTCGGTCG GCTGCGGCGT CTACGCCGAG
GTGCAGGAAG GCGTCTGGAC CAAGCAGGAA CCGGCGTTCG ATCACCCCAT CAATCGGGGC
GCGCATTGCG CCAAGGGCGC CTCGCTGCGC GAGCACGGGC ACTCCACCCA GCGCCTGAAG
TATCCCATGA AGCTGGTCGA CGGCAAGTGG CAGCGCCTCG AGTGGGACCA GGCCATCGAG
GAGATCGGCG ACAAGGTACT GGAACTGCGC GAACAGCACG GCCCCGACAG CGTCTACTGG
CTGGGCTCGG CCAAGTTCAG CAATGAACAA GCCTACTTGA TGCGCAAGCT CGCCTCGCTG
TGGGGCACCA ACAATACCGA TCACCAGGCA CGCATCTGCC ACTCCACCAC CGTGGCGGGC
GTGGCCAATA CCTGGGGATA CGGGGCGATG ACCAACTCGC TGAACGACAT GCACTTCAGC
AAGTCGATCC TGTTCATCGG CTCCAACCCC AGCGAAGCGC ACCCGGTGGC CATGCAGCAC
ATCCTGCATG CCAAGGAGCG CAATCAGGCG CAGATCATCG TCGTCGACCC GCGCTTCACG
CGTACCGCGG CCAAGGCCAA CAAGTACGTG CGTCTGCGTC CGGGGTCCGA CGTGGCCTAC
ATCTGGGGCC TGCTCTGGCA TATCTTCGAA AACGGCTGGG AAGACCAGCA GTTCATCGAT
CAGCGCGTGT TCGGCATGGA CGAAGTGCGC CGTGAAGTCG CCCAGTTCAC GCCGGACGTG
GTAGAGCGCA TCACCGGCGT CAGCGAAGCC GACATGTACG ATGTCGCCAA GCGCATCAGC
GAGAATCGCC CCGGCTGCGT AGTGTGGTGC ATGGGCGGGA CCCAGCACAC CACCGGCAAC
AACAACACTC GTGCCTACTG CATTCTCGAG CTGGCGCTGG GCAATATCGG CGTTTCCGGC
GGCGGTGCCA ACATCTTCCG TGGTCACGAC AACGTCCAGG GCGCGACCGA CCTGGGGCTG
GGCTCCGACT CGCTGCCCGG TTACTACGGG CTCAGCGAAG GCGCCTGGCA GCACTGGGCC
AAGGTCTGGA ACGTCGATTA CGAGTGGATC AAGAACCGTT ACGACCAGAC CGAATACAAC
GGTGCCCTGC CGATGAACTC CAACGGCATC ACCGTCTCGC GCTGGGTCGA CGGGGTCCTC
GAGGAAGACG AGCACATCGC TCAGCGCTCC AGCCTCAAGG CGATGTTCTA CTGGGGGCAC
GCGGTCAACT CCCAGACCCG CGGCCCGGAA ATGAAAAAGG CCATGAGTCA GCTCGAACTG
ATGGTCGTGG TCGATCCCTA CCCCACCGTC GCTGCCGTCA TGCACGACCG CACGGATGGC
GTGTACCTGC TGCCCGCGGC CACGCAGTTC GAGACCACCG GTAGCGTGAC CGCCACCAAT
CGCTCCCTGC AATGGCGCGA TCAGGTCATC GAACCCATGT TCGATTCCAA GCCCGACCAC
GAGATCATGT ATCTCATGGC CCAGAAGCTG GGCTTCGGCG ACGAGTTCAC CCGCAACTTC
GCCATCGAGG ACGGCCGTCC GGTCATCGAG GACGTGTTGC GCGAGATCAA CGCGGGCATG
TGGACCGTGG GCTATACCGG GCAAAGCCCC GAGCGCCTCA AGGAACACCA GAAGAACTGG
CACACCTTCA ACTTCGATAC CCTGAAGGCG GAAGGCGGCC CCTCGGATGG CGACTTCTAC
GGCCTGCCGT GGCCGTGCTG GGGCAAGCCC GGCATGAAAC ACCCGGGCTC GCCCAACCTC
TACGACATCA GCAAGAGCGT CGCCGAGGGT GGCATGCCGT TCCGCGCCCG CTTCGGCATC
GAGCATGAAG GGCAACCACT GCTCGCCGAT GGCTCCTACT CCAAGGATTC GGAACTCAAC
GACGGATATC CCGAGTTCAC CTCCGACATG CTCAAGCAGC TGGGCTGGTG GGACGACCTC
ACCGCCGAGG AAAAAGCCGC CGCGGAGGGC AAGAACTGGA AGACCGACCT GTCCGGCGGG
ATTCAGCGCG TAGCCATCGC GCACGGTTGC GCGCCCTACG GCAACGCCAA GGCCCGCTGC
CGGGTCTGGA CCTTCCCGGA TGAAGTGCCC AAGCATCGCG AACCGCTCTA TACCAGCCGG
CGCGATCTCG CCGACGAGTA CCCGACCTGG GACGACAAGG CATCGCTGTT CCGTCTGCCG
ACGCTGTATC GCTCGATTCA GGAGAAGGAC TTCAGCAAGG AGTTCCCGAT CATCCTCACC
TCGGGACGTC TGGTCGAGTA CGAAGGCGGT GGCGAGGAAA CACGCTCCAT GTCGTGGCTC
GCCGAGCTGC AGCAGGAGAT GTTCGTCGAG ATCAACCCGG CGCAGGCCAA CGACCTGGGC
ATCAAGAACG ACGACATGGT CTGGGTCCAC GGTCCCGAGG GCGGCAAGGT CAAGGTCAAG
GCCATGGTGA CGCCGCGTGT CGCACGTGAC GTGGCCTTCA TGCCCTTCCA TTTCGGCGGT
GTCTATCAGG GCGAGAGCCT GGCCGACAAG TACCCCGAAG GCGCGCGCCC GTACGTGCTC
GGCGAAGCGG CCAATACCGC CACGACCTAC GGCTACGATC CGGTGACCCT GATGCAGGAA
ACCAAGTGCA CCCTGTGCCG GATCGAAAAA GCCTCCGCCT GA
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| Protein sequence | MRLTRKSSQP AGQGGLGISR RQFLQRSGVA TGGLAAAGFM GHGMMQAASA KEKTAYSDAP
VETKRTICSH CSVGCGVYAE VQEGVWTKQE PAFDHPINRG AHCAKGASLR EHGHSTQRLK
YPMKLVDGKW QRLEWDQAIE EIGDKVLELR EQHGPDSVYW LGSAKFSNEQ AYLMRKLASL
WGTNNTDHQA RICHSTTVAG VANTWGYGAM TNSLNDMHFS KSILFIGSNP SEAHPVAMQH
ILHAKERNQA QIIVVDPRFT RTAAKANKYV RLRPGSDVAY IWGLLWHIFE NGWEDQQFID
QRVFGMDEVR REVAQFTPDV VERITGVSEA DMYDVAKRIS ENRPGCVVWC MGGTQHTTGN
NNTRAYCILE LALGNIGVSG GGANIFRGHD NVQGATDLGL GSDSLPGYYG LSEGAWQHWA
KVWNVDYEWI KNRYDQTEYN GALPMNSNGI TVSRWVDGVL EEDEHIAQRS SLKAMFYWGH
AVNSQTRGPE MKKAMSQLEL MVVVDPYPTV AAVMHDRTDG VYLLPAATQF ETTGSVTATN
RSLQWRDQVI EPMFDSKPDH EIMYLMAQKL GFGDEFTRNF AIEDGRPVIE DVLREINAGM
WTVGYTGQSP ERLKEHQKNW HTFNFDTLKA EGGPSDGDFY GLPWPCWGKP GMKHPGSPNL
YDISKSVAEG GMPFRARFGI EHEGQPLLAD GSYSKDSELN DGYPEFTSDM LKQLGWWDDL
TAEEKAAAEG KNWKTDLSGG IQRVAIAHGC APYGNAKARC RVWTFPDEVP KHREPLYTSR
RDLADEYPTW DDKASLFRLP TLYRSIQEKD FSKEFPIILT SGRLVEYEGG GEETRSMSWL
AELQQEMFVE INPAQANDLG IKNDDMVWVH GPEGGKVKVK AMVTPRVARD VAFMPFHFGG
VYQGESLADK YPEGARPYVL GEAANTATTY GYDPVTLMQE TKCTLCRIEK ASA
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