Gene Csal_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1907 
Symbol 
ID4026820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2167433 
End bp2168893 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID637967101 
Productamino acid permease-associated region 
Protein accessionYP_573958 
Protein GI92114030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG CGATGAATCG AACGAAGGCT TCTCAAGGGG CAAGCGAACT GACTCGCGTG 
CTGGCGCGCA AGGACGTGCT GGCACTGGCG TTTGGGGCCA TGGTCGGCTG GGGCTGGATC
GTCATGACCG GCAACTGGAT CCAGTCGGCA GGGAGCATGG GCGCCATTCT GGCCTTTCTC
ATCGGCGGCG TGGCCATCGT GCTGGTCGGG TTGACCTACG CCGAACTGGC CTCGGCGATG
CCGCAGGTAG GGGGGGAGCA TGTGTACAGC TATCATGCGC TGGGGCATTT CGCTTCCTTT
CTGTGTACCT GGACCATCGT GCTCGGCTAC ATGAGCGTGG TGTCGTTCGA AGCCGTGGCG
TTGCCCACGG TATTCGAGAA CCTGTTCCCC GGCTATGCCG TCGGCCATCT CTGGACGATT
GCCGGATGGG ACGTCAAGGC TACCTGGGTG GCGGTCGGCG TCATCGGCTC GGTGATCATG
ATGGCGATCA ACTACATCGG CATTCGCACG GCGGCCCTGG TGCAGAAGCT GGTGACCGTG
CTGATTCTGG TCGTGGGCGT GATGTTCATC ACGGGAGCAC TCTTCACCGG CGAGACCGTC
CACATGGAGC CGTTGTTCAA CGTCGAGAGC GGCCTCGTGG GCGGCATCAT GACGGTCATG
ATCATGGTGC CGTTCATGTT CGTGGGCTTC GACGTGATTC CCCAGGCAGC GGAGGAAATC
AATCTACCGT TTCGCGACAT CGGCAAGGTG CTGATGATCT CGGTCATCCT GGCGGTGTTC
TGGTATGCGT TGATCATCCT GGGGACGTCG CTGATGCTCG ATCCGCAGGC GCTGGAAGCC
TCCACGCTGG CGGTACCGGA TGCCATGCAG GCCGTTTTCT CGGCGCCCTG GGCCGGCAAG
CTGATGGTGC TGGCAGGGAT CGCCGGCATC ATCACGAGCT GGAACGCCTT CTACATCGGC
GGCTCCCGCG CCGTTTACGC CCTGGCGCAC GCGGGCATGC TGCCGGCCTT TCTGGGCAAG
CTGCATCCGC GTTACAAGAC GCCCAGCAAT GCGGTGATCA TGATCGGCGC CGTGTCGTGC
CTGGCGCCGT TCTTCGGGCG TCCGATGCTG GTGTGGCTCG TCGATGCCGG CGGGCTGGGC
ATCGTCATCG CGTACCTGTT CGTGGCCTTG TCTTTCCTGG TGATGCGTCA CAAGCGTGCC
GACATGCCGC GCCCCTTCAA GGTGCGCTAT GGCAAGGCGG TGGGCATCGT CGCCGTGCTT
CTGTCGCTGG GAATGGTGAG CCTTTACCTG CCGGGCAGCC CCTCGGCGCT GCTGCCGATC
GAGTGGGTCG TCTTCGGGGC CTGGATGCTG CTGGGACTGG GGATGTATCT CTGGTCGCGT
CGGCGCTATG GCGTGGCGTA CAGCGATCGC ATGATGGCGC GCGAACTCTC CGGTGACAGC
GCGGTGAAAG ACATCGAGTG A
 
Protein sequence
MSIAMNRTKA SQGASELTRV LARKDVLALA FGAMVGWGWI VMTGNWIQSA GSMGAILAFL 
IGGVAIVLVG LTYAELASAM PQVGGEHVYS YHALGHFASF LCTWTIVLGY MSVVSFEAVA
LPTVFENLFP GYAVGHLWTI AGWDVKATWV AVGVIGSVIM MAINYIGIRT AALVQKLVTV
LILVVGVMFI TGALFTGETV HMEPLFNVES GLVGGIMTVM IMVPFMFVGF DVIPQAAEEI
NLPFRDIGKV LMISVILAVF WYALIILGTS LMLDPQALEA STLAVPDAMQ AVFSAPWAGK
LMVLAGIAGI ITSWNAFYIG GSRAVYALAH AGMLPAFLGK LHPRYKTPSN AVIMIGAVSC
LAPFFGRPML VWLVDAGGLG IVIAYLFVAL SFLVMRHKRA DMPRPFKVRY GKAVGIVAVL
LSLGMVSLYL PGSPSALLPI EWVVFGAWML LGLGMYLWSR RRYGVAYSDR MMARELSGDS
AVKDIE