Gene Csal_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1895 
Symbol 
ID4026808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2154283 
End bp2155515 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content63% 
IMG OID637967089 
Productribonuclease BN, putative 
Protein accessionYP_573946 
Protein GI92114018 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGCC CACAACTCCT TGACCGCCGC TGGCTGACCA TCATCCTGCG CAGCTTGCGT 
GAACTGATTC AGCGTTTCGA TGCGCATGAC GGACTCAAGA CGGCATCCGC CTTGACCTAC
ACCACGTTGT TCGCGGTGGT GCCGTTCATG ACCGTCTTGT ATGCAATGCT CTCGGCCATT
CCCAGCTTCC AGGGGATCAG CGAACAGCTG CAGGCCTTGA TCTTCAGCCA GTTCGTGCCG
GCGACCGGGT CGGCACTGGT CGAGCATTTG CGCGATTTTT CACGACAGGC GCGTAGCCTG
ACGTTGATCG GGTTGATGTT CTTGCTGGTG ACGGCGGTGA TGATGATGGT GACCGTGGAG
CGCGCCTTCA ACAATATCTG GCATGTGTCG CGCAGCCGAC GCGGCGTTTC CAGTTTCCTG
CTGTACTGGG CAGTGCTTAC GCTCGGCCCC TTGTTGCTGG GCTCGGGGTT CTTGCTGTCT
TCCTATCTGG CATCGCTGAC ACTGGTGCGA GGGGCCGCCG AAGTGCTGGG CGGGCCGGTC
GCCTTTCTGC GTTTGCTGCC GCTGACGTTG AGTTTCACGG CGTTCGTGTT CATCTACATG
GCCGTGCCCA ACTGCCGGGT ACGGTTTCGG CACGCCGTGG CGGGCGCCGG GCTGGCCGCC
CTGGCGCTGG AGCTCGCCAA GGGGGCATTC TCGCTGTATG TCACGTACTT TCCGTCTTAT
CAGGTCATCT ACGGGACCTT TGCCGCCGTT CCCTTGTTTC TGGTGTGGGT GTTCTTGTCC
TGGGCGATCG TGTTGGTCGG CGCTGAACTG GCTGCCTGGC TGGGGGAGCG TCGGCGTGCC
GAGTGGCGCT ACTGGGCGCC GTTCTGGCAA GCGCTGGGGG TCGTGTCTCA CCTGTACGAC
GCCCATCGGC GAGGGCAGGC CGTGTACGAT CGGGAACTGG CGATGCGACT GGGGGCTCGC
TATTCGGACG TGATGGCGCC CTTGCAGACA CTGGGCGTGG CCGTGCAGCT CGATAACGAT
CGCTGGATGC TGGGACGCGA CCTCGGTGCC TTGTCGCTCT GGGATTTCCA GCGAGCCATG
CCCTGGGCCG TGCCTCTTGG CGAATCGTCG CCCGCGCCGG AGATGCAGGC GATCCATGCG
GCGCTGCAAG AAGCCGAGCG CCATCGCCAG CAGGTGCTGA CGCAACCCAT GGAGCATCTG
TTGGCAGAGG GGGCACGCAA CGACTCGCCG TGA
 
Protein sequence
MRRPQLLDRR WLTIILRSLR ELIQRFDAHD GLKTASALTY TTLFAVVPFM TVLYAMLSAI 
PSFQGISEQL QALIFSQFVP ATGSALVEHL RDFSRQARSL TLIGLMFLLV TAVMMMVTVE
RAFNNIWHVS RSRRGVSSFL LYWAVLTLGP LLLGSGFLLS SYLASLTLVR GAAEVLGGPV
AFLRLLPLTL SFTAFVFIYM AVPNCRVRFR HAVAGAGLAA LALELAKGAF SLYVTYFPSY
QVIYGTFAAV PLFLVWVFLS WAIVLVGAEL AAWLGERRRA EWRYWAPFWQ ALGVVSHLYD
AHRRGQAVYD RELAMRLGAR YSDVMAPLQT LGVAVQLDND RWMLGRDLGA LSLWDFQRAM
PWAVPLGESS PAPEMQAIHA ALQEAERHRQ QVLTQPMEHL LAEGARNDSP