Gene Csal_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1889 
SymbolmetH 
ID4028252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2145603 
End bp2149340 
Gene Length3738 bp 
Protein Length1245 aa 
Translation table11 
GC content65% 
IMG OID637967083 
ProductB12-dependent methionine synthase 
Protein accessionYP_573940 
Protein GI92114012 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCG CCATTGCTTC ATCCCTACCG CTCGCCGCCT CGTTCGCCTC GCTGCAGGAA 
CAGCTGTCAC GGCGCATCAT GATCCTCGAT GGCGGCATGG GGACCATGCT GCAAGGCTAC
GAACTCGACG AGGGCGACTT TCGCGGGCAA CGCTTCGCCG ACTGGCCCAG CGAGCTCAAG
GGCAACAACG ACCTGCTGGT CCTGACGCGT CCCGACGTGG TGCGTGACAT CCACCGTGCC
TACCTCGAGG CCGGTGCCGA TATCGTCGAG ACCAACACCT TCAACAGCAC CCAGCTGTCG
CAATCCGATT ACGGCATGCA GTCCCTGGTC CCCGAGCTCA ATCGCGAAGC CGCGCGCCTG
GCCAAGGACG TCTGCGACGC GGTGGCCCGG GAAACCGGGG TGCCGCGCTA CGTCGCCGGG
GTGCTGGGAC CGACATCGCG CACGGCATCG CTGTCGCCGG ACGTCAACGA TCCCGCCAAG
CGAAACGTGA CCTTCGATCA GCTGTGCGAC AATTATTATC AGGCCGCCGA GGCGCTCCTC
GAGGGCGGTG CCGATCTGAT CATGATCGAA ACCATCTTCG ACACGCTCAA TGCCAAGGCG
GCCATCTACG CCCTCGAGAT GCTGTTCGAA GCGCGCGGCG AACGCTTGCC GGTGATGATT
TCCGGCACCA TCACCGACGC TTCCGGGCGC ACGCTCTCCG GGCAGACCAC CGAAGCGTTC
TGGAACTCGA TACGCCACGC CCAGCCGCTG TCCGTGGGGC TCAACTGCGC CCTCGGCGCG
GCGGAGCTGC GCCCCTATCT CGAGGAGCTT TCCCACAAGG CCGATACCTA CGTCTCGGCC
CACCCCAACG CCGGGCTCCC CAACGAATTC GGCGAGTACG ACCAGACCGC CGAGGAAATG
GCCACGATCG TGCGCGAGTT CGCCGAAAGT GGCCTGGTCA ACATCATCGG CGGCTGTTGC
GGTACGGCGC CGGAACACAT CGCCGCCATT CGCGATGCCG TGGGCGAGCT GCCGCCGCGC
CAGGTCGTCG AGCGCCCCAA GGCATGTCGC CTCGCGGGGC TGGAGCCCTT CAACATCGAG
GCGGACTCGC TGTTCGTCAA TGTCGGCGAG CGCACCAACG TGACCGGCTC CGCGCGCTTC
AAGCGCCTGA TCAAGGAGGA GGACTACACC ACGGCGCTCG AGGTGGCGCT CGAACAGGTC
GAAAACGGCG CCCAGGTCAT CGACATCAAC ATGGACGAGG GCATGCTCGA GTCACAGGAC
GCCATGGTGC GCTTTCTGAA CTTGATCGCC TCGGAGCCCG ACATCTCCCG CGTCCCGGTC
ATGATCGATT CCTCGAAGTG GGAAATCATC GAGGCGGGAC TCAAGTGCGT TCAGGGCAAG
GCCGTCGTCA ACTCGATTTC CCTCAAGGAA GGCGAAGACG CCTTTCGGCA ACAGGCCACG
GCATGCCGCC GGTATGGCGC CGCCATCGTG GTCATGGCCT TCGACGAGGA AGGTCAGGCG
GACACTTTCC AGCGCAAGAC GGAAATCTGC GAACGCGCCT ACCGCCTGCT GGTGGACGAT
ATCGGCTTCC CCGCCGAGGA CATCATCTTC GATCCCAACA TCTTCGCCAT CGCCACGGGC
ATCGAGGAGC ACAACAACTA CGCCGTCGAC TTCATCGAAG CATCGAAGTG GATTCGCGAG
CACCTGCCGC ACGCCATGCT CTCGGGCGGC GTGTCCAATG TGTCGTTCTC CTTCCGGGGC
AATAACGCGG TACGCGAGGC GATCCATTCG GTCTTCCTCT ATCACGCCAT CAAGGCCGGG
CTGACCATGG GGATCGTCAA CGCCGGCCAG CTGGCGGTCT ACGACGACCT GCCCGAGGAG
CTCCGCGAGG CCGTCGAAGA CGTGGTGCTC AACCGCCGCG ACGATGGCAC GGAGCGCCTG
CTCGATATCG CCGACAAGTA CAAGGGCGAT GGCAGCGGCG GCGAGAAGAA AGAAGACCTG
GAATGGCGCA GCTGGGAGGT CGAGAAGCGC ATCGAGCATG CCCTGATCAA GGGCATCACC
GCTTACATCG AGGAAGACAC CGAGCAGGCC CGGCAGCGTG CCGCGCGCCC CATCGAGGTC
ATCGAAGGTC CGCTGATGGA CGGCATGAAC GTGGTCGGCG ACCTTTTCGG CGCCGGCAAG
ATGTTCCTGC CCCAGGTGGT CAAGTCGGCC CGAGTGATGA AGCAGGCGGT GGCCTACCTG
ATTCCCTACA TCGAAGCCGA GAAGAGCGAA GGCACCCAGG CCAAGGGCAA GATCGTGATG
GCCACGGTCA AGGGGGACGT TCACGACATC GGCAAGAACA TCGTCGGCGT GGTCCTGCAG
TGCAACAACT ATGAGGTCAT CGACCTCGGT GTCATGGTGC CGGCGGAAAA GATCTTCGCC
GCCGCGCGCG AGCACAATGC GGACATCATC GGCCTGTCCG GACTGATCAC CCCGTCGCTG
GACGAGATGG TCCATGTCGC CAAGGAAATG CAGCGCCAGG GCTTTACGCT GCCGCTGCTG
ATCGGTGGTG CGACGACTTC CAAGGCCCAC ACGGCGGTCA AGATCGCCCC GCAGTACGAC
CAGCCGGTCA TCTATGTCAG CGATGCCTCG CGTGCGGTCG GCGTCGCCAG CCGCCTGCTC
TCCCCGAGCC TCAAGCCGGG CTATGTCGCG GAGATCAGCG ACGAATACGA CAAGGTGCGC
GAGCGTAACG CCAAGCGCCG TCCCAAGGCC GCCGACCTGA GCTATGCCGA GGCGCGCAAG
CGCCGCCCGG CTCTCGACTG GGCCGACTAC ACGCCGCCGA CACCGACCTT CAGCGGGCTC
AAGGTGTTCG ACGACTACCC GCTGGAAGAG CTGGTCGAAC GCATCGACTG GACGCCCTTC
TTCATGAGCT GGCAGCTCTC GGGCAAGTAC CCCAGGATTC TCGAGGACGA CGTCGTCGGC
GAGGCGGCAC GCAGCCTGTT CGCCGATGCG CAGACGATGC TGCGCAAGCT GATCGACGAG
CGCCATATCA CGGCACGCGG CGTCATCGGC ATGTGGCCGG CCAATAGCGT GGATGACGAT
ACCCTCGAGG TCTATGCCGA CACCTCGCGT CGCACGGTGA TCGAGCGCCT GCATCACATT
CGCCAGCAGA CGACCAAGAA TCGCGACGGC GTCTGCCAGA GCCTCGCCGA CTTCATCGCG
CCGCGTCGTC TCGACAACGG CGAGCCCAGC GACCAGGTGG ACTGGATCGG CGGCTTCGCG
GTGACCACGG GACATGGCGC GGATGCGCTG GCGGCGCAGT ACGAAGCGGC CGGCGACGAC
TACAACGCCA TCATGGTCAA GGCCCTGGCC GACCGGCTCG CGGAAGCCTT CGCCGAACGC
ATGCACGAGC GGGTGCGCAA GGAATTCTGG GCCTACGTGC CCGACGAAAC CCTGGACAAC
GATGCCCTGA TCGCCGAGCA GTACCAGGGC ATCCGTCCCG CGCCGGGCTA CCCGGCCTGT
CCGGATCATA CCGAAAAGGC CACGCTGTTC CGGCTGCTGG ACGCCACCGC CAAGACCGGC
ATCGAGCTGA CCGACAGTTA CGCCATGTGG CCTTCGGCCG CGGTCTCCGG CTGGTATTTC
TCGCACCCGC GCTCGAAGTA TTTCTCCACC GGCAAGATCG GTCGCGATCA GGTCGAGTCG
CTGGCAGCGC GCAAGGGCAT GTCACTCGCC GAGCTCGAGC GCTGGCTGTC GCCGGTACTG
TCCTACGATC CCGAATGA
 
Protein sequence
MPAAIASSLP LAASFASLQE QLSRRIMILD GGMGTMLQGY ELDEGDFRGQ RFADWPSELK 
GNNDLLVLTR PDVVRDIHRA YLEAGADIVE TNTFNSTQLS QSDYGMQSLV PELNREAARL
AKDVCDAVAR ETGVPRYVAG VLGPTSRTAS LSPDVNDPAK RNVTFDQLCD NYYQAAEALL
EGGADLIMIE TIFDTLNAKA AIYALEMLFE ARGERLPVMI SGTITDASGR TLSGQTTEAF
WNSIRHAQPL SVGLNCALGA AELRPYLEEL SHKADTYVSA HPNAGLPNEF GEYDQTAEEM
ATIVREFAES GLVNIIGGCC GTAPEHIAAI RDAVGELPPR QVVERPKACR LAGLEPFNIE
ADSLFVNVGE RTNVTGSARF KRLIKEEDYT TALEVALEQV ENGAQVIDIN MDEGMLESQD
AMVRFLNLIA SEPDISRVPV MIDSSKWEII EAGLKCVQGK AVVNSISLKE GEDAFRQQAT
ACRRYGAAIV VMAFDEEGQA DTFQRKTEIC ERAYRLLVDD IGFPAEDIIF DPNIFAIATG
IEEHNNYAVD FIEASKWIRE HLPHAMLSGG VSNVSFSFRG NNAVREAIHS VFLYHAIKAG
LTMGIVNAGQ LAVYDDLPEE LREAVEDVVL NRRDDGTERL LDIADKYKGD GSGGEKKEDL
EWRSWEVEKR IEHALIKGIT AYIEEDTEQA RQRAARPIEV IEGPLMDGMN VVGDLFGAGK
MFLPQVVKSA RVMKQAVAYL IPYIEAEKSE GTQAKGKIVM ATVKGDVHDI GKNIVGVVLQ
CNNYEVIDLG VMVPAEKIFA AAREHNADII GLSGLITPSL DEMVHVAKEM QRQGFTLPLL
IGGATTSKAH TAVKIAPQYD QPVIYVSDAS RAVGVASRLL SPSLKPGYVA EISDEYDKVR
ERNAKRRPKA ADLSYAEARK RRPALDWADY TPPTPTFSGL KVFDDYPLEE LVERIDWTPF
FMSWQLSGKY PRILEDDVVG EAARSLFADA QTMLRKLIDE RHITARGVIG MWPANSVDDD
TLEVYADTSR RTVIERLHHI RQQTTKNRDG VCQSLADFIA PRRLDNGEPS DQVDWIGGFA
VTTGHGADAL AAQYEAAGDD YNAIMVKALA DRLAEAFAER MHERVRKEFW AYVPDETLDN
DALIAEQYQG IRPAPGYPAC PDHTEKATLF RLLDATAKTG IELTDSYAMW PSAAVSGWYF
SHPRSKYFST GKIGRDQVES LAARKGMSLA ELERWLSPVL SYDPE