Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1889 |
Symbol | metH |
ID | 4028252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2145603 |
End bp | 2149340 |
Gene Length | 3738 bp |
Protein Length | 1245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637967083 |
Product | B12-dependent methionine synthase |
Protein accession | YP_573940 |
Protein GI | 92114012 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCCG CCATTGCTTC ATCCCTACCG CTCGCCGCCT CGTTCGCCTC GCTGCAGGAA CAGCTGTCAC GGCGCATCAT GATCCTCGAT GGCGGCATGG GGACCATGCT GCAAGGCTAC GAACTCGACG AGGGCGACTT TCGCGGGCAA CGCTTCGCCG ACTGGCCCAG CGAGCTCAAG GGCAACAACG ACCTGCTGGT CCTGACGCGT CCCGACGTGG TGCGTGACAT CCACCGTGCC TACCTCGAGG CCGGTGCCGA TATCGTCGAG ACCAACACCT TCAACAGCAC CCAGCTGTCG CAATCCGATT ACGGCATGCA GTCCCTGGTC CCCGAGCTCA ATCGCGAAGC CGCGCGCCTG GCCAAGGACG TCTGCGACGC GGTGGCCCGG GAAACCGGGG TGCCGCGCTA CGTCGCCGGG GTGCTGGGAC CGACATCGCG CACGGCATCG CTGTCGCCGG ACGTCAACGA TCCCGCCAAG CGAAACGTGA CCTTCGATCA GCTGTGCGAC AATTATTATC AGGCCGCCGA GGCGCTCCTC GAGGGCGGTG CCGATCTGAT CATGATCGAA ACCATCTTCG ACACGCTCAA TGCCAAGGCG GCCATCTACG CCCTCGAGAT GCTGTTCGAA GCGCGCGGCG AACGCTTGCC GGTGATGATT TCCGGCACCA TCACCGACGC TTCCGGGCGC ACGCTCTCCG GGCAGACCAC CGAAGCGTTC TGGAACTCGA TACGCCACGC CCAGCCGCTG TCCGTGGGGC TCAACTGCGC CCTCGGCGCG GCGGAGCTGC GCCCCTATCT CGAGGAGCTT TCCCACAAGG CCGATACCTA CGTCTCGGCC CACCCCAACG CCGGGCTCCC CAACGAATTC GGCGAGTACG ACCAGACCGC CGAGGAAATG GCCACGATCG TGCGCGAGTT CGCCGAAAGT GGCCTGGTCA ACATCATCGG CGGCTGTTGC GGTACGGCGC CGGAACACAT CGCCGCCATT CGCGATGCCG TGGGCGAGCT GCCGCCGCGC CAGGTCGTCG AGCGCCCCAA GGCATGTCGC CTCGCGGGGC TGGAGCCCTT CAACATCGAG GCGGACTCGC TGTTCGTCAA TGTCGGCGAG CGCACCAACG TGACCGGCTC CGCGCGCTTC AAGCGCCTGA TCAAGGAGGA GGACTACACC ACGGCGCTCG AGGTGGCGCT CGAACAGGTC GAAAACGGCG CCCAGGTCAT CGACATCAAC ATGGACGAGG GCATGCTCGA GTCACAGGAC GCCATGGTGC GCTTTCTGAA CTTGATCGCC TCGGAGCCCG ACATCTCCCG CGTCCCGGTC ATGATCGATT CCTCGAAGTG GGAAATCATC GAGGCGGGAC TCAAGTGCGT TCAGGGCAAG GCCGTCGTCA ACTCGATTTC CCTCAAGGAA GGCGAAGACG CCTTTCGGCA ACAGGCCACG GCATGCCGCC GGTATGGCGC CGCCATCGTG GTCATGGCCT TCGACGAGGA AGGTCAGGCG GACACTTTCC AGCGCAAGAC GGAAATCTGC GAACGCGCCT ACCGCCTGCT GGTGGACGAT ATCGGCTTCC CCGCCGAGGA CATCATCTTC GATCCCAACA TCTTCGCCAT CGCCACGGGC ATCGAGGAGC ACAACAACTA CGCCGTCGAC TTCATCGAAG CATCGAAGTG GATTCGCGAG CACCTGCCGC ACGCCATGCT CTCGGGCGGC GTGTCCAATG TGTCGTTCTC CTTCCGGGGC AATAACGCGG TACGCGAGGC GATCCATTCG GTCTTCCTCT ATCACGCCAT CAAGGCCGGG CTGACCATGG GGATCGTCAA CGCCGGCCAG CTGGCGGTCT ACGACGACCT GCCCGAGGAG CTCCGCGAGG CCGTCGAAGA CGTGGTGCTC AACCGCCGCG ACGATGGCAC GGAGCGCCTG CTCGATATCG CCGACAAGTA CAAGGGCGAT GGCAGCGGCG GCGAGAAGAA AGAAGACCTG GAATGGCGCA GCTGGGAGGT CGAGAAGCGC ATCGAGCATG CCCTGATCAA GGGCATCACC GCTTACATCG AGGAAGACAC CGAGCAGGCC CGGCAGCGTG CCGCGCGCCC CATCGAGGTC ATCGAAGGTC CGCTGATGGA CGGCATGAAC GTGGTCGGCG ACCTTTTCGG CGCCGGCAAG ATGTTCCTGC CCCAGGTGGT CAAGTCGGCC CGAGTGATGA AGCAGGCGGT GGCCTACCTG ATTCCCTACA TCGAAGCCGA GAAGAGCGAA GGCACCCAGG CCAAGGGCAA GATCGTGATG GCCACGGTCA AGGGGGACGT TCACGACATC GGCAAGAACA TCGTCGGCGT GGTCCTGCAG TGCAACAACT ATGAGGTCAT CGACCTCGGT GTCATGGTGC CGGCGGAAAA GATCTTCGCC GCCGCGCGCG AGCACAATGC GGACATCATC GGCCTGTCCG GACTGATCAC CCCGTCGCTG GACGAGATGG TCCATGTCGC CAAGGAAATG CAGCGCCAGG GCTTTACGCT GCCGCTGCTG ATCGGTGGTG CGACGACTTC CAAGGCCCAC ACGGCGGTCA AGATCGCCCC GCAGTACGAC CAGCCGGTCA TCTATGTCAG CGATGCCTCG CGTGCGGTCG GCGTCGCCAG CCGCCTGCTC TCCCCGAGCC TCAAGCCGGG CTATGTCGCG GAGATCAGCG ACGAATACGA CAAGGTGCGC GAGCGTAACG CCAAGCGCCG TCCCAAGGCC GCCGACCTGA GCTATGCCGA GGCGCGCAAG CGCCGCCCGG CTCTCGACTG GGCCGACTAC ACGCCGCCGA CACCGACCTT CAGCGGGCTC AAGGTGTTCG ACGACTACCC GCTGGAAGAG CTGGTCGAAC GCATCGACTG GACGCCCTTC TTCATGAGCT GGCAGCTCTC GGGCAAGTAC CCCAGGATTC TCGAGGACGA CGTCGTCGGC GAGGCGGCAC GCAGCCTGTT CGCCGATGCG CAGACGATGC TGCGCAAGCT GATCGACGAG CGCCATATCA CGGCACGCGG CGTCATCGGC ATGTGGCCGG CCAATAGCGT GGATGACGAT ACCCTCGAGG TCTATGCCGA CACCTCGCGT CGCACGGTGA TCGAGCGCCT GCATCACATT CGCCAGCAGA CGACCAAGAA TCGCGACGGC GTCTGCCAGA GCCTCGCCGA CTTCATCGCG CCGCGTCGTC TCGACAACGG CGAGCCCAGC GACCAGGTGG ACTGGATCGG CGGCTTCGCG GTGACCACGG GACATGGCGC GGATGCGCTG GCGGCGCAGT ACGAAGCGGC CGGCGACGAC TACAACGCCA TCATGGTCAA GGCCCTGGCC GACCGGCTCG CGGAAGCCTT CGCCGAACGC ATGCACGAGC GGGTGCGCAA GGAATTCTGG GCCTACGTGC CCGACGAAAC CCTGGACAAC GATGCCCTGA TCGCCGAGCA GTACCAGGGC ATCCGTCCCG CGCCGGGCTA CCCGGCCTGT CCGGATCATA CCGAAAAGGC CACGCTGTTC CGGCTGCTGG ACGCCACCGC CAAGACCGGC ATCGAGCTGA CCGACAGTTA CGCCATGTGG CCTTCGGCCG CGGTCTCCGG CTGGTATTTC TCGCACCCGC GCTCGAAGTA TTTCTCCACC GGCAAGATCG GTCGCGATCA GGTCGAGTCG CTGGCAGCGC GCAAGGGCAT GTCACTCGCC GAGCTCGAGC GCTGGCTGTC GCCGGTACTG TCCTACGATC CCGAATGA
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Protein sequence | MPAAIASSLP LAASFASLQE QLSRRIMILD GGMGTMLQGY ELDEGDFRGQ RFADWPSELK GNNDLLVLTR PDVVRDIHRA YLEAGADIVE TNTFNSTQLS QSDYGMQSLV PELNREAARL AKDVCDAVAR ETGVPRYVAG VLGPTSRTAS LSPDVNDPAK RNVTFDQLCD NYYQAAEALL EGGADLIMIE TIFDTLNAKA AIYALEMLFE ARGERLPVMI SGTITDASGR TLSGQTTEAF WNSIRHAQPL SVGLNCALGA AELRPYLEEL SHKADTYVSA HPNAGLPNEF GEYDQTAEEM ATIVREFAES GLVNIIGGCC GTAPEHIAAI RDAVGELPPR QVVERPKACR LAGLEPFNIE ADSLFVNVGE RTNVTGSARF KRLIKEEDYT TALEVALEQV ENGAQVIDIN MDEGMLESQD AMVRFLNLIA SEPDISRVPV MIDSSKWEII EAGLKCVQGK AVVNSISLKE GEDAFRQQAT ACRRYGAAIV VMAFDEEGQA DTFQRKTEIC ERAYRLLVDD IGFPAEDIIF DPNIFAIATG IEEHNNYAVD FIEASKWIRE HLPHAMLSGG VSNVSFSFRG NNAVREAIHS VFLYHAIKAG LTMGIVNAGQ LAVYDDLPEE LREAVEDVVL NRRDDGTERL LDIADKYKGD GSGGEKKEDL EWRSWEVEKR IEHALIKGIT AYIEEDTEQA RQRAARPIEV IEGPLMDGMN VVGDLFGAGK MFLPQVVKSA RVMKQAVAYL IPYIEAEKSE GTQAKGKIVM ATVKGDVHDI GKNIVGVVLQ CNNYEVIDLG VMVPAEKIFA AAREHNADII GLSGLITPSL DEMVHVAKEM QRQGFTLPLL IGGATTSKAH TAVKIAPQYD QPVIYVSDAS RAVGVASRLL SPSLKPGYVA EISDEYDKVR ERNAKRRPKA ADLSYAEARK RRPALDWADY TPPTPTFSGL KVFDDYPLEE LVERIDWTPF FMSWQLSGKY PRILEDDVVG EAARSLFADA QTMLRKLIDE RHITARGVIG MWPANSVDDD TLEVYADTSR RTVIERLHHI RQQTTKNRDG VCQSLADFIA PRRLDNGEPS DQVDWIGGFA VTTGHGADAL AAQYEAAGDD YNAIMVKALA DRLAEAFAER MHERVRKEFW AYVPDETLDN DALIAEQYQG IRPAPGYPAC PDHTEKATLF RLLDATAKTG IELTDSYAMW PSAAVSGWYF SHPRSKYFST GKIGRDQVES LAARKGMSLA ELERWLSPVL SYDPE
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