Gene Csal_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1888 
Symbol 
ID4028251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2144796 
End bp2145386 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID637967082 
ProductHesB/YadR/YfhF 
Protein accessionYP_573939 
Protein GI92114011 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGC CCATTCAGAT CACCGACAAC GCTCAGGAAT ACCTCGCCGA GCTGTTGGCC 
AAGCAGAACG TCGAAGGCAT TGCGGTGCGT ATCTTCATCA CGCAGCCGGG CACCCCCTAC
GCCGAGACGT GCCTGGCCTA TTGTCGCCCG GGCGAGGAAG AACCCAGCGA TGAGCGCCTC
GACCTGGACA AGATCACGGT CTACCTCGAG AAGAACAGCA TCGCGTTTCT CGAAGAGGCG
GTGGTCGACT TCAACGCGGA CCGCATGGGT GGCCAGCTGA CCATCAAGGC GCCCAACGCC
AAGATGCCCA AGGTCAATGC GGACAGCCCC CTCGAAGATC GCGTCAACTA CGTGCTCTAC
AGCGAGATCA ATCCGGGCCT GGCCGCGCAT GGTGGCGAGA TCCGCCTGAT GCAGCTGACC
GAGGAAAACG TTGCCGTGCT GCAGTTCGGT GGCGGCTGCC AGGGGTGTGC CGCGGTCGAT
CTCACGCTCA AGGAAGGGGT CGAGAAGACC TTGATCGAGC GCGTGCCCGA ACTTGCCGGC
ATCCGCGATG TGACCGACCA CACGGACGAC ACCAACGCCT ATTATCGCTG A
 
Protein sequence
MSQPIQITDN AQEYLAELLA KQNVEGIAVR IFITQPGTPY AETCLAYCRP GEEEPSDERL 
DLDKITVYLE KNSIAFLEEA VVDFNADRMG GQLTIKAPNA KMPKVNADSP LEDRVNYVLY
SEINPGLAAH GGEIRLMQLT EENVAVLQFG GGCQGCAAVD LTLKEGVEKT LIERVPELAG
IRDVTDHTDD TNAYYR