Gene Csal_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1869 
Symbol 
ID4028389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2126038 
End bp2127096 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID637967063 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_573920 
Protein GI92113992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.788659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCG TCGCCACTCA AGCGTCACCT GCGACGCCGA CGTCGTCGGC GACCGACTCC 
CTGCTGGAGA TCCGCGGGCT CTACAAGCAT TTTCCCCTGG CCGAGGGGTT TCTCGAACAA 
CTGCGCTTCG AGAAAGGTCG TCTGGTGCGG CGCAACGATA GCGTGCATGC CATCAATGGC 
GTCGACCTCG CGGTGCGCAG AGGCGAGGCC CTTTGCGTGG TCGGCGAATC CGGCTGCGGC 
AAATCCACCG TGGCGCGCCT GGTCATGGGG TTGCTGTCGC CCAGTGCCGG CGAAATCCGC 
TACGACGGCC AGCGCATCGA CGACCTGCGC GGCAAGCGGC TGCTGCCCTA CCGCCAGCGC 
ATGCAGATGA TCTTTCAGAA CCCTTATGCC TCGCTGAATC CTCGCATGAC GATTCAGCAG 
ACACTGGAAG AGCCCCTGCG TTTCCACCAC CCGGAGTGGA CGACGCCGCA GATACACGAC 
AAGGTGGCCG AGGTCATGGC CTCGGTGGGT ATCGATCCCG AATGGGGCAA GCGTTTCGGG 
CACGAGTTCT CCGGCGGGCA GCGCCAGCGC ATCGCCATCG CCCGGGCCCT GGCCGTCGAT 
CCGGAATTCA TCGTCGCCGA CGAGCCGATT TCGGCCCTCG ACGTGTCGAT TCAGGCGCAA 
GTGCTGAACC TGCTGATGGA TGCCCAGGCC GAACGCCACC TGACCTATCT CTTCATCACG 
CACGATCTGG CGGTCGTCGA GCATTTCGGC ACCCGGGTGG CGGTCATGTA TCTGGGCACG 
GTGTGCGAAT TGGCGGATAC CCGCTCGTTG TTCGCACGGC CGCGGCATCC CTATACCCAG 
GCCCTGTTGT CGGCGATTCC GCGCCTCGAG GACAACCGGC CCGAGCATGT CAGACTGTCC 
GGCGAGGTGC CCACCCCGGT CCACCTGCCT TCGGGCTGTG TCTTCCATGG GCGGTGTCCA 
CACGTCACGG AACGCTGTCG CCAGGAAGTC CCGCAGCTCA TCGCCACCGA CGACGGCAAC 
CGGGTCGCCT GTCATGGCGT CGAGGAGGGA CGCCTCTGA
 
Protein sequence
MNAVATQASP ATPTSSATDS LLEIRGLYKH FPLAEGFLEQ LRFEKGRLVR RNDSVHAING 
VDLAVRRGEA LCVVGESGCG KSTVARLVMG LLSPSAGEIR YDGQRIDDLR GKRLLPYRQR 
MQMIFQNPYA SLNPRMTIQQ TLEEPLRFHH PEWTTPQIHD KVAEVMASVG IDPEWGKRFG 
HEFSGGQRQR IAIARALAVD PEFIVADEPI SALDVSIQAQ VLNLLMDAQA ERHLTYLFIT 
HDLAVVEHFG TRVAVMYLGT VCELADTRSL FARPRHPYTQ ALLSAIPRLE DNRPEHVRLS 
GEVPTPVHLP SGCVFHGRCP HVTERCRQEV PQLIATDDGN RVACHGVEEG RL