Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1863 |
Symbol | |
ID | 4028383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2116924 |
End bp | 2118759 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637967057 |
Product | surface antigen (D15) |
Protein accession | YP_573914 |
Protein GI | 92113986 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACGC TGCGTCACTC AGCCGTGCAG CGCCTCCTCT GCGGGGTGGC CTTGAGCGTC GTCACGTCCA GTGCCATGGC CCTGGAGGCG TCGGTCGAAG GCCTCGACGG CCCGGCTGCC ACAAACGTCG TCAACTTCCT CGAGCCGCTC GATACCCGGA ACATCAGTGA GGCGCGTCTC GACAGCGATA TCCGTGAGCG TACGCAACGA GCGTTGCGCG CATTCGGCTA TTATTCGCCC CAGATCGAGA CCTCCTATCC CGACGGCATG TTCGCTGGCG ACGTGGTGAT CGCCATCGAT CCCGGGCCCC GTACCCATAT CACGCAACTC GATCTGGGCG TCGACGGCGC TGCCGGCGAC GATCCCGCCT TCCGGAAGGC CCTCGCGAGC ATACCGCTCG AGGAAGGCGA CCCGCTTCGC CACGACCGTT ACGACAGCGC CAAGACCCGG CTTTCCACAC TGGCGCTGGA ACGGGGCTAT TTCGATGCGG GATTCGCGCA ACAACGCATG GAAGTGCGCC CCTGGGAGGC GAGCGCACGC CTGTTTCTGC GCATGCGCAG CGGTCCTCGC TACCGTTTCG GCGATATTCG TTTCGCGGGC AGTCAAATCG AAGAAGCCCG TCTGCGGCGC ATGCTGCCTT TCACCAAGGG CGATCCCTAT CTGGCGGGGC AACTGGCCGA ATACAACCAG CGTCTGGGAC AGACCAACTG GTTTCGCGGC ATCGCCGTTC GCCCGCGCAT CGGCGACGAG CGCAACGTCA CGCGGGGCGG GCAATGGTGG CAAGAGGCCA CGGGGCGCAC GCCGCCCCTG AGCAGCGGCG CGGGGCTGGC CGCCGTGCGC CGTCTGCATG GCCTGCAAAG CACCGACGTG CCGGTGGATG TGGATCTCGT CCCCGCAGAC CGGCACAAGT TCGAAACCGG CATCGGCTAT GCCACCGATG TCGGGCCACG GGTGCAATTC AGCTGGGAAA TGCCCTGGCT CAACGACCGC GGTCACAGCC TGTCCAATTC GCTTTATCTC TCGGGACCGG AACAACGCTT CGATGGCGAG TACGTGATGC CTCTGGCGAA TCCCCTGCGC GACAGTTATC GCCTCAGTTA TGGGCTGCGC AGTCTCGATA ACGAGGATAC CCAGAGTCTG GAAAGCTCGG TGGAGCTTGC CCGGCGCTGG GAGTTCGACA ACGACTGGGT ACAAGAACTC TACTTCCGAA CCACCTACGA GGACTTCACC CAGGCGGATC AGGACGAGCA GGTGCTCCTG CTGTATCCCG GCATCAGCTG GACCCGCACG CGCACGCGGC AACCCAACTT CCCCAGGTGG GGGGATCGCC AGCGCCTGGC GCTGGAAGTC TCCGATCCCG CCTGGGGCTC GGACGCACGC TTTCTGCGCG CCAGGTTCGA CTCGCAATGG ATTCGTACGC TGGGCTCGGA CAATCGCTTC GTCGGCCGCA TCGGCGGTGG CGCCACGGCG ACCGACACCT TCGACAAGAT TCCCCCCTCG CTGCGCTTCT TCGCCGGTGG CGATCAGAGC GTGCGCGGCT ACAGCTACGA AAGCCTGTCT CCGGAAAACG ATGACGGCGA ACTGCTCGGC GGCCAGCACA TGCTGACCGC CAGTGCCGAG TATCAGCGCC GAGTCACCGG CAACTGGTGG GGAGCCACCT TCGTCGATAC CGGCAACGCC TTCAACGCCT GGTGGCCCGA GGAACTCAAG ACCGGGGCCG GGGTGGGGGT TCGCTGGATC TCGCCCGTGG GTCCGGTGCG GTTCGATATC GCCCATCCGT TCGACAATGA GGAGGATGCG TGGCGTCTGC ACTTCGCCAT CGGGCCGGAA TTCTGA
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Protein sequence | MRTLRHSAVQ RLLCGVALSV VTSSAMALEA SVEGLDGPAA TNVVNFLEPL DTRNISEARL DSDIRERTQR ALRAFGYYSP QIETSYPDGM FAGDVVIAID PGPRTHITQL DLGVDGAAGD DPAFRKALAS IPLEEGDPLR HDRYDSAKTR LSTLALERGY FDAGFAQQRM EVRPWEASAR LFLRMRSGPR YRFGDIRFAG SQIEEARLRR MLPFTKGDPY LAGQLAEYNQ RLGQTNWFRG IAVRPRIGDE RNVTRGGQWW QEATGRTPPL SSGAGLAAVR RLHGLQSTDV PVDVDLVPAD RHKFETGIGY ATDVGPRVQF SWEMPWLNDR GHSLSNSLYL SGPEQRFDGE YVMPLANPLR DSYRLSYGLR SLDNEDTQSL ESSVELARRW EFDNDWVQEL YFRTTYEDFT QADQDEQVLL LYPGISWTRT RTRQPNFPRW GDRQRLALEV SDPAWGSDAR FLRARFDSQW IRTLGSDNRF VGRIGGGATA TDTFDKIPPS LRFFAGGDQS VRGYSYESLS PENDDGELLG GQHMLTASAE YQRRVTGNWW GATFVDTGNA FNAWWPEELK TGAGVGVRWI SPVGPVRFDI AHPFDNEEDA WRLHFAIGPE F
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