Gene Csal_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1860 
Symbol 
ID4028380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2113787 
End bp2115079 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content65% 
IMG OID637967054 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_573911 
Protein GI92113983 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCA ACGTGTATGG AAGCGAGCTT TCGGCCGCGG TGGCAGCGGC AGCGCTGTCT 
TCGGTAGGGC ACCAGGTCGT CTGGTGCCCC CATCCCGACT TCCCCTGGCA TAGTCTGGAA
AGCGCCGAAT GGCTGATACG CGAGCCGGGG CTCAAGGAAC AGATCGACAC CGGCTGCCGC
TCGGGCCTGC TGACGATTGC CGAGACGCCT GCGCATGGCG AGGTGGACAT CCACTGGCTG
GCCCTGGCAC CCGACCAGCG AGACGCGGCC GAGGCGTATG TGGCCGACGT GCCGGCCGCG
CAGAGCACGC CGCTGGTGGT GATCAACAAC TCGACCTTCC CGGTGGGTCA CACCGAACGC
TTCGAGGCCT TGCTCGGTCA TGCCGGACAG GTGGCCGTCG CCTTGCCGGA CATGCTGGAA
GAAGGGCGTG CCTGGGAGAC CTTCACGCGT CCCTCGCGCT GGCTGCTGGG CAGCGAGGAC
ACCCAGGCCA CGCACCAGGT CCGCGAATTG CTGCGCGCCT TCAACCGCCG GCAAGACGTC
TTCCAGCTCA TGCCGCGGCG CGCCGCGGAA CTGACCAAGC TTGCCATCAT CGGCATGCTG
GCGACGCGCA TCAGCTACAT GAACGAGCTG GCGGGGCTCG CCGATTCCCT GGACGTGGAT
GTCGAGCACG TGCGTCTGGG GATGGGCGCC GACAGCCGCA TCGGCTTCGA GTATCTCTAT
CCCGGTTGCG GTTTCGGCGG TCCGAGCTTC TCGCGCGATC TCATGCGTCT GGCCGATGTC
CAGCATGCCT CGGGGCGCGA GTCGCTGTTG CTCGAGCATG TACTGGATAT CAACGAGCAG
AAGAAGGAGA CGCTGTTCCG CAAGTTCTGG AACCACTTCC ACGGCCAGCT CTTCGAGCGT
CGAGTGGCGA TCTGGGGGGC CGCGTTCAAG CCCGGCACCA CGCGTATCGA CCAGGCACCG
GTGCTCACCC TGCTCGATGC CTTGCTGGCA CAGGGCGTCA ACGTCAACGT TCACGACCCC
GAGGCATTGC CGGCGCTGCG TGCGTTGTAT GGCGATCACC CACGCGTCAC GTTCTGCGAT
GACGACTTCT ATGCCGCATG CGACGGGGCG GATGCCCTGA TGCTGGTGAC GGAGTGGAAG
TGCTACTGGA ACCCCAACTG GCGGCAATTG AGCGAGCGCA TGGCCACGCC GCTGATTCTC
GACGGACGCA ACATCTTCGA TCCCGACTAT GTCGCGGCTC GCGGCTTGAT CTATCGCGGT
ATTGGCCGGC GAGCGGATCC GACAGGCGCC TGA
 
Protein sequence
MRVNVYGSEL SAAVAAAALS SVGHQVVWCP HPDFPWHSLE SAEWLIREPG LKEQIDTGCR 
SGLLTIAETP AHGEVDIHWL ALAPDQRDAA EAYVADVPAA QSTPLVVINN STFPVGHTER
FEALLGHAGQ VAVALPDMLE EGRAWETFTR PSRWLLGSED TQATHQVREL LRAFNRRQDV
FQLMPRRAAE LTKLAIIGML ATRISYMNEL AGLADSLDVD VEHVRLGMGA DSRIGFEYLY
PGCGFGGPSF SRDLMRLADV QHASGRESLL LEHVLDINEQ KKETLFRKFW NHFHGQLFER
RVAIWGAAFK PGTTRIDQAP VLTLLDALLA QGVNVNVHDP EALPALRALY GDHPRVTFCD
DDFYAACDGA DALMLVTEWK CYWNPNWRQL SERMATPLIL DGRNIFDPDY VAARGLIYRG
IGRRADPTGA