Gene Csal_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1855 
Symbol 
ID4028375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2109574 
End bp2110338 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID637967049 
Producttetratricopeptide TPR_2 
Protein accessionYP_573906 
Protein GI92113978 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG GTCTGAAAAG ACTGTGCGGC GCGGGAGCCT TGTTGCTCCC GCTGTCCGTG 
TGGGCCCAGC CCGCGGTCGA TGACTTGACC GACCAGTCGA GCAATAATTT CTACAACCAG
ACGGCCGCAC GCGAGTCGGG CGGCAATCTG GCCCTGTTCA ACCAGTTGAA GGACAATCAG
CGCGAGATCC AGCAACTGCG AGGGCAGATC GAGGAGCTCC GTTACCAGCT CGAACAGCAG
AAGCAGCTGT CGCAGGAACG TTACCTGGAT CTCGAGAAAC GCCTCGACAC GCTGGCCTCG
CAACGCCGTG AAGCCATCGA CACTGATGCC GCGGCATCGG TCACGGAAGA GGCATCCGCC
ACGGGCGACC AGGACGCTCA GACCGGCGAT CAGGGACGCG ATGCCTATCA GGCCGCCTTC
CAGAAGGTCC AGGCACGCGA GTTCGATGCA GCGATCAAGG CCTTCGAGGA CTTCATCGGC
GACTACCCGA ATTCCAGTTT ACGTGCCAAT GCGCATTATT GGCTGGGTGA GCTGTACTCC
GCCCAATCGC AGCTGGATGC CGCCGCCAAG TCGTTCCAGA CGGTCATCGA CGATTTCCCC
GAAAGCAACA AGATGCCCGA TGCGTTGTAC AAGCTGGGGC TGCTCAAGGC ACGCCAGGGA
CATCCCGATG AAAGCCGTTC GCTGCTCGAT CGGGTACGCA ACGACTATCC TGAAAGCAAC
GCGGCCAGCA TGGCCGAGGA CTTCCTCAAC CAGTCCGGCA ACTGA
 
Protein sequence
MKHGLKRLCG AGALLLPLSV WAQPAVDDLT DQSSNNFYNQ TAARESGGNL ALFNQLKDNQ 
REIQQLRGQI EELRYQLEQQ KQLSQERYLD LEKRLDTLAS QRREAIDTDA AASVTEEASA
TGDQDAQTGD QGRDAYQAAF QKVQAREFDA AIKAFEDFIG DYPNSSLRAN AHYWLGELYS
AQSQLDAAAK SFQTVIDDFP ESNKMPDALY KLGLLKARQG HPDESRSLLD RVRNDYPESN
AASMAEDFLN QSGN