| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1853 |
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| Symbol | tolB |
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| ID | 4028373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2107692 |
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| End bp | 2108978 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637967047 |
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| Product | translocation protein TolB |
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| Protein accession | YP_573904 |
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| Protein GI | 92113976 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC TCAATCTGTG GGCAGCTTCG TTGCTGTTAA TGCTGTGTGC CGGCATGGCG
CATGCCGAAC TCACCATCGA GATCACCAAG GGAAGCGATC AGGCGATTCC CATCGCCATC
GTTCCCATGG CCAATGGCGA CGATCTTCCC GAAAACGTCT CGCGCATCGT CAGCAACGAC
CTCGAGCGTA GCGGCCGTTT CGAGCCGCTG CCGCGGGAGT CGCTGATTTC CCGTCCGAGC
AGTAGTGAAG AGGTTCACTA TCAGGATTGG CAGCAGCTGG ACAGCGACTA TCTGGTCGTC
GGCAAGATCG ACAACCAGGG CGGTGAATAC CGGATCCAGT ACGAACTGCT CAACGTGAAT
GGCCAAAACC GCATGCTCGG CGAGGTCGTG ACCTCGAGTC GCGACCAGCT GCGCGACAGC
GCGCATTACA TCAGCGATCA GATTTTCGAG GAAATCACCG GCATTCGCGG GGCATTTTCC
ACCAGCATCG CGTACGTCAC CGCCAGCGGC GTCGGCGATG ACATCGATTA TGCCCTCAGC
GTCGCCGATG CCGATGGCCA CAATAGCCAG CAAATCCTGT CCTCGGACGA ACCCATCCTG
TCACCGGCCT GGTCACCGGA TGGCGGCAAG CTGGCGTACG TGTCTTTCGA AACCGGGCGC
CCCGGCATCT ATGTGCAGAA TCTCGCCACC GGCCAGCGTG TCCGTCTGAC CTCGTTCGAG
GGCATCAACG GTGCGCCGGC CTGGTCGCCA GACGGTCGCA AACTGGCGAT GTCGCTGTCC
AAGGACGGCC AGCCGGAAAT CTATGTCATG GACATCGCGT CCCGCGATCT GCGGCGCCTG
ACGCAAAGCG ACGCCATCGA CACCGAGCCC GAATGGGCCC CGAACGGCCG CAGCCTGATC
TTCACGTCCG ACCGCAGCGG CAACCCGCAG ATCTATCGCT ACGACCTGGG CAGCGGGCGG
GCCGAACGCC TCACCTTCAC CGGCAGCTAC AATTCACGTG GTCGTTTCAG CCCGGATGGA
GACGCGATCT TCATGGTGAC GCGTGACGAC TCGGGCTATC ACGTGGCGCG TCAGGATCTG
GATACCGATC GCATGACGAT TCTCACCGAT TCCGATTGGG ACGAGTCGCC CAGTGTTGCG
CCGAACGGCA CCATGGTAAT CTTCGCCACC CAGGAAGGAA CGCGCGGCGT GCTGGGGGCG
GTATCGGCCG ATGGCAGCGC ATCTTTCCGT CTGCCATCGC CGCAGGGCGA CGTGCGGGAA
CCCGCATGGT CTCCCTTTTT GGACTAA
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| Protein sequence | MKRLNLWAAS LLLMLCAGMA HAELTIEITK GSDQAIPIAI VPMANGDDLP ENVSRIVSND
LERSGRFEPL PRESLISRPS SSEEVHYQDW QQLDSDYLVV GKIDNQGGEY RIQYELLNVN
GQNRMLGEVV TSSRDQLRDS AHYISDQIFE EITGIRGAFS TSIAYVTASG VGDDIDYALS
VADADGHNSQ QILSSDEPIL SPAWSPDGGK LAYVSFETGR PGIYVQNLAT GQRVRLTSFE
GINGAPAWSP DGRKLAMSLS KDGQPEIYVM DIASRDLRRL TQSDAIDTEP EWAPNGRSLI
FTSDRSGNPQ IYRYDLGSGR AERLTFTGSY NSRGRFSPDG DAIFMVTRDD SGYHVARQDL
DTDRMTILTD SDWDESPSVA PNGTMVIFAT QEGTRGVLGA VSADGSASFR LPSPQGDVRE
PAWSPFLD
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