| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1850 |
|---|
| Symbol | |
|---|
| ID | 4028076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 2105457 |
|---|
| End bp | 2106134 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637967044 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_573901 |
|---|
| Protein GI | 92113973 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.83962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC CGCATCTGAT CATGAACGCC AGCCTGGTCG TTCAGTTGGT CATGCTTCTT
CTGCTGGCGG CTTCCGTCGC CTCCTGGATC GTGATTTTCC AGCGCGGCTT CGCCCTGCGG
CGTGCCGAAA AGGCCTATCG GGACTTCGAG GATCGCTTCT GGTCCGGCGT GGATCTCAAT
GAACTCTATC GCGAACTGCC CGCCGAGCAG GAATCGCTCG GCGCGGAACA CGTCTTCCGC
TCCGGTTTCC GCGAGTTCAA CCGCCTGATG GCCAAGACCC AGAGTACCGA GGCGGTTCTC
GAAGGGGTGC AGCGCGGTCA ACGGGTCGCG CTGTCCCGCG AAGAAGATCG TCTGCAGCTG
CATCTGACCT TCCTGGCTAC CGTGGCCTCG GCCACCCCCT ACATCGGTCT TTTCGGTACC
GTATGGGGCA TCATGGGCTC GTTCCAGAGC CTGTCCATGG CCCAGCAGGC CACGCTTTCC
ACGGTCGCGC CATGGATTGC GGAAGCGCTG GTAGCCACGG CCATGGGGCT GTTCGCCGCG
ATCCCCGCCG TGATTTTCTA CAACCGGCTT TCTGCCCATG CGACGAGGCT TCTCGGCAAA
TACGAAAACT TCGCCGAGGA ATTCCACGCC ATCCTGCATC GAAACCTGCA GGGACGCAGC
GAACGCGCGG CATCCTGA
|
|---|
| Protein sequence | MSIPHLIMNA SLVVQLVMLL LLAASVASWI VIFQRGFALR RAEKAYRDFE DRFWSGVDLN
ELYRELPAEQ ESLGAEHVFR SGFREFNRLM AKTQSTEAVL EGVQRGQRVA LSREEDRLQL
HLTFLATVAS ATPYIGLFGT VWGIMGSFQS LSMAQQATLS TVAPWIAEAL VATAMGLFAA
IPAVIFYNRL SAHATRLLGK YENFAEEFHA ILHRNLQGRS ERAAS
|
|---|
| |