Gene Csal_1848 details

Gene Information

• Locus tag: Csal_1848
• Symbol: ruvB
• ID: 4028074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2103961
• End bp: 2105013
• Gene Length: 1053 bp
• Protein Length: 350 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637967042
• Product: Holliday junction DNA helicase RuvB
• Protein accession: YP_573899
• Protein GI: 92113971
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2255] Holliday junction resolvasome, helicase subunit
• TIGRFAM ID: [TIGR00635] Holliday junction DNA helicase, RuvB subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.9139
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGACA CCGACCGTTT GATCGCGGCG CAACCTCAAG GCAGCGAGGT GCACGTGGAT 
CATGCCATTC GTCCGCGTCG TCTTGCCGAG TACATCGGCC AGCCCCGCGT CCGCGAGCAG 
CTGGATATCT TCATCAGCGC CGCGCGCAAG CGGGGCGACA GCCTCGACCA CACCCTCGTC 
TTCGGCCCGC CCGGCCTGGG CAAGACCACG CTGGCCAATA TCATCGCCGC CGAGATGGAT 
GTCGATATCA AGTCGACCTC CGGCCCCGTG CTCGAACGCG CGGGCGACCT GGCCGCCATG 
CTGACCAACC TCCAGGCCGG CGACGTCCTG TTCATCGACG AGATCCATCG TCTGCCCGCT 
TCCGTCGAGG AAGTGCTTTA CCCGGCGATG GAGGACTACC AGCTCGATAT CATGATCGGG 
GAGGGGCCCG CGGCGCGCTC CATCAAGCTG GACCTGCCGG CCTTCACGCT GGTCGGCGCC 
ACGACACGCG CCGGCTTGCT CACGTCGCCG CTGCGCGACC GCTTCGGTAT CGTCCAGCGC 
CTCGAGTTCT ACGCCGTCGA GGAACTCACC GAGATCGTCG TGCGCTCGGC TCACTTGCTG 
GGCGTCGACG CCGAGCGCGA CGGTGCCGCC GAAATCGCCC GGCGCGCGCG GGGCACGCCG 
CGTATCGCCA ATCGCCTGTT GCGTCGTGTG CGTGACTTCG CCGAAGTGCG TGGCGATGGC 
CGGCTGACCG CGGCCATCGC CGACCAGGCG CTCAACATGC TGCACGTCGA TCGCCACGGG 
CTCGATCACA TGGATCGGCG CCTGCTGATG GCGATGATCG AGAAATTCGA CGGTGGCCCC 
GTGGGGGTCG ACAGTCTCGC CGCGGCCATC AGCGAGGAAC GCGACACGAT CGAGGATGTC 
CTAGAGCCGT ACTTGATCCA GCAGGGCTTC ATGATGCGAA CGGCGCGCGG GCGTGTGGTC 
ACTCGCTCGG CCTATGAACA TTTCGGCTTG ACGCCGACCG ACGCCGTCGC GACGGCCGTT 
CCCCTCACGC CCCCCGGAGA AAGCGACGCA TGA 

 

Protein sequence

MIDTDRLIAA QPQGSEVHVD HAIRPRRLAE YIGQPRVREQ LDIFISAARK RGDSLDHTLV 
FGPPGLGKTT LANIIAAEMD VDIKSTSGPV LERAGDLAAM LTNLQAGDVL FIDEIHRLPA 
SVEEVLYPAM EDYQLDIMIG EGPAARSIKL DLPAFTLVGA TTRAGLLTSP LRDRFGIVQR 
LEFYAVEELT EIVVRSAHLL GVDAERDGAA EIARRARGTP RIANRLLRRV RDFAEVRGDG 
RLTAAIADQA LNMLHVDRHG LDHMDRRLLM AMIEKFDGGP VGVDSLAAAI SEERDTIEDV 
LEPYLIQQGF MMRTARGRVV TRSAYEHFGL TPTDAVATAV PLTPPGESDA