Gene Csal_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1842 
Symbol 
ID4028068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2098583 
End bp2099524 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID637967036 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_573893 
Protein GI92113965 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0532817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TGATTCTCGA TGCCGCCACC CTGGGCGACG ACATAGACCT CACGCCTCTG 
CACGAGGCGG TGGACACGCT CGAGGTCCAT GCACACACCG CGCGCGAGGA ACGCCAGGCG
CGCCTTGCCG GCGCCACCGT GGCGCTCACC AACAAGGTCG TCATCGATGC CGAATTGATC
GACGCCCTGC CCGATCTCGA ACTGATCTGT GTGCTGGCCA CGGGCACCAA CAATATCGAC
ATGCAAGCCG CCAAGGCCCG TGGCATCGAG GTGCGCAATG TCACGGCCTA CGGCACGGCC
AGCGTGGCCC AGCATACGTT GATGCTCATG CTGGCGCTGG CCAACCGTCT CCCCCTTTAC
ATGCGCGACG TCGCCGCCGG GCGCTGGAAC GACAGCCCCA TGTTCTGCCT GCTCGACCAC
CGCACCCTGC AACTGGCCGG CAAGCACCTC GTCATCGTCG GACACGGCGA ACTCGGACGT
GCCGTGGCCC ATCTGGCCGA GGCGTTCGGC ATGCGCGTCA CCTTCGCCGC GCGCCCCGGC
AATGAAGCGC ACGACTCACG CCCCGCCCTG GCGTCCCTGG CGGGAGAACT CGATGTGCTC
AGCCTGCATT GCCCGCTGAA CGACGAGACG CGTCACCTCG TGGATGCCGA CATGCTGGCA
CGGTTCAAGC CAGGTGCCTT GCTGCTCAAT TGCGCACGGG GCGGTATCAT AGATGAAAGC
GCCGCGCTGG ACGCGCTACG CAACGGTACC TTGGGAGGCC TGGGCGTCGA CAGTCTGCCC
GACGAGCCGC CGCGCGAGGG GCATGCACTC ATCGACGCGC TGCAGGAAGG CCATAACCTC
ATCGTGACGC CGCACAGTGC GTGGATCTCG CCGGAAGCGC GTGCCAACGT CGTGCGTCTG
ACCGTCGACA ACCTGCGCCA CTGGCTCGCC TCGCGCGCTT GA
 
Protein sequence
MKAVILDAAT LGDDIDLTPL HEAVDTLEVH AHTAREERQA RLAGATVALT NKVVIDAELI 
DALPDLELIC VLATGTNNID MQAAKARGIE VRNVTAYGTA SVAQHTLMLM LALANRLPLY
MRDVAAGRWN DSPMFCLLDH RTLQLAGKHL VIVGHGELGR AVAHLAEAFG MRVTFAARPG
NEAHDSRPAL ASLAGELDVL SLHCPLNDET RHLVDADMLA RFKPGALLLN CARGGIIDES
AALDALRNGT LGGLGVDSLP DEPPREGHAL IDALQEGHNL IVTPHSAWIS PEARANVVRL
TVDNLRHWLA SRA