Gene Csal_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1825 
Symbol 
ID4029099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2074831 
End bp2075607 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID637967014 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_573876 
Protein GI92113948 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00469409 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCCC CGTCCACTCC CGGGTCCCCC CGCGTCGCGA TCGTGACCGG CAGTTCCAGC 
GGTATTGGCG AAGCCGTCGT CAAGCAGTTC TGCCAGGAAG GGTTGCAAGT GCTGGCGGTG
GACGCCAACC CGCAAGGCGA GAATGTGGCC GATGCCGCGG GGGCGGTGTT CTATCATGCC
GACCTGACGA CATCCGCCGC ATGTCGCGGC GCGGTGGAAG AAGCGATAAA GCGTTTCGGG
CATGTCGATA TTCTGATCAA CAACGCCGGC ATCCAGCATG TCGCGCCCCT GGAGACGTTT
CCAGAGGCCA AGTGGCGCCA GATCATCGAC TTGATGCTGA CGGCGCCCTT TTTGCTGACA
CAGGCGGCAT GGCCGTACAT GCGCCAGTCT TCATGGGGAC GTATCGTCAA CGTGGCCTCC
ATTCACGCCA GTGTGGCGTC GCCCGGCAAG GCGGCATACG TGAGCGCCAA GCATGGCTTG
ATCGGGCTGA CCAAGACCGC GGCGCTCGAG GGCGGCGAGC TGGGCATTAC CGCCAATGCC
ATTTGCCCCG CTTATGTCAG GACGCCGCTG GTGGAAAGCC AGATCGCCGA CCAGGCACGC
CTCAATGGCA TGCCCGAGCA GGAGGTGATC GACAATGTCA TGCTCAAGAA CGCTGCGATC
AAACGTCTCA TCGAGCCGTC CGAGGTGGCC GCGCTGGTGA GCTACCTGGC ATCGGACAAG
GCCAGCGCCG TGACCGGCGC GAGCTGGAAC ATGGATCTGG GGTGGACGGC GCAATGA
 
Protein sequence
MPAPSTPGSP RVAIVTGSSS GIGEAVVKQF CQEGLQVLAV DANPQGENVA DAAGAVFYHA 
DLTTSAACRG AVEEAIKRFG HVDILINNAG IQHVAPLETF PEAKWRQIID LMLTAPFLLT
QAAWPYMRQS SWGRIVNVAS IHASVASPGK AAYVSAKHGL IGLTKTAALE GGELGITANA
ICPAYVRTPL VESQIADQAR LNGMPEQEVI DNVMLKNAAI KRLIEPSEVA ALVSYLASDK
ASAVTGASWN MDLGWTAQ