Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1825 |
Symbol | |
ID | 4029099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2074831 |
End bp | 2075607 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637967014 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_573876 |
Protein GI | 92113948 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00469409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCC CGTCCACTCC CGGGTCCCCC CGCGTCGCGA TCGTGACCGG CAGTTCCAGC GGTATTGGCG AAGCCGTCGT CAAGCAGTTC TGCCAGGAAG GGTTGCAAGT GCTGGCGGTG GACGCCAACC CGCAAGGCGA GAATGTGGCC GATGCCGCGG GGGCGGTGTT CTATCATGCC GACCTGACGA CATCCGCCGC ATGTCGCGGC GCGGTGGAAG AAGCGATAAA GCGTTTCGGG CATGTCGATA TTCTGATCAA CAACGCCGGC ATCCAGCATG TCGCGCCCCT GGAGACGTTT CCAGAGGCCA AGTGGCGCCA GATCATCGAC TTGATGCTGA CGGCGCCCTT TTTGCTGACA CAGGCGGCAT GGCCGTACAT GCGCCAGTCT TCATGGGGAC GTATCGTCAA CGTGGCCTCC ATTCACGCCA GTGTGGCGTC GCCCGGCAAG GCGGCATACG TGAGCGCCAA GCATGGCTTG ATCGGGCTGA CCAAGACCGC GGCGCTCGAG GGCGGCGAGC TGGGCATTAC CGCCAATGCC ATTTGCCCCG CTTATGTCAG GACGCCGCTG GTGGAAAGCC AGATCGCCGA CCAGGCACGC CTCAATGGCA TGCCCGAGCA GGAGGTGATC GACAATGTCA TGCTCAAGAA CGCTGCGATC AAACGTCTCA TCGAGCCGTC CGAGGTGGCC GCGCTGGTGA GCTACCTGGC ATCGGACAAG GCCAGCGCCG TGACCGGCGC GAGCTGGAAC ATGGATCTGG GGTGGACGGC GCAATGA
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Protein sequence | MPAPSTPGSP RVAIVTGSSS GIGEAVVKQF CQEGLQVLAV DANPQGENVA DAAGAVFYHA DLTTSAACRG AVEEAIKRFG HVDILINNAG IQHVAPLETF PEAKWRQIID LMLTAPFLLT QAAWPYMRQS SWGRIVNVAS IHASVASPGK AAYVSAKHGL IGLTKTAALE GGELGITANA ICPAYVRTPL VESQIADQAR LNGMPEQEVI DNVMLKNAAI KRLIEPSEVA ALVSYLASDK ASAVTGASWN MDLGWTAQ
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