Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1794 |
Symbol | |
ID | 4028594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2040543 |
End bp | 2041271 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966983 |
Product | LrgB-like protein |
Protein accession | YP_573845 |
Protein GI | 92113917 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTCC CGGTACTCGA TCGGCTCTGG GTGTATCTTT CGGCGAGCCC GCTGCTGTAT TTGCTGGTGA CCCTGCTGGC TTTCATCGCC GCGACTCGCA TCAATCGACG CCTGGGCGGA ACGCCGTTCC TGCATCCGGT GATAATCGCC ATCGTGCTGC TCATCGGCTT CCTGAAGCTC ACTCGCACCG ATTACGCCAC CTATTTCGAG GGCGCGCAGT TCATTCATTT TCTCCTCGGC CCGGCGACCG TGGCATTGGC GATTCCCCTC TATGACTATC GCGAGCGTGT CAGGCGCATG TTGCTGCCGA TCCTGCTGGG GTGCGGCGCA GGTATCGTGA CGGCGGTCAC GTCCACCGTC GGGCTCGCCA TGCTGATGGG GGCCAGCCGC GAAACCGTGC TGACGCTGGC GCCTCGCTCG GTGACGTCAC CCATTGCCAT GGGGATCGCC GAAAAGCTGG GCGGCATTCC TTCCCTGGCG GCGGGGCTGG TGCTGCTGAC GGGCTCTGTG GGCTGCGCCC TGGGGCCGGT GATCTTTCGC CTGGTCAAGG TGCGTGACCC GAGCGTCCAG GGGTTTGCCA TGGGCCTGGC GGCGCACGGC TTCGGCACGG CGCATTCGTT TTCTTCCATC GGTGCCGTGG CCGGTGCCTT CGCGGGCTTG TCCATGGGAC TGACCGGGCT TTTCACGGCG TTCTTGTTGC CGCCCATCGT GCACCTGTTC GGGCTCTAG
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Protein sequence | MNLPVLDRLW VYLSASPLLY LLVTLLAFIA ATRINRRLGG TPFLHPVIIA IVLLIGFLKL TRTDYATYFE GAQFIHFLLG PATVALAIPL YDYRERVRRM LLPILLGCGA GIVTAVTSTV GLAMLMGASR ETVLTLAPRS VTSPIAMGIA EKLGGIPSLA AGLVLLTGSV GCALGPVIFR LVKVRDPSVQ GFAMGLAAHG FGTAHSFSSI GAVAGAFAGL SMGLTGLFTA FLLPPIVHLF GL
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