Gene Csal_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1794 
Symbol 
ID4028594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2040543 
End bp2041271 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID637966983 
ProductLrgB-like protein 
Protein accessionYP_573845 
Protein GI92113917 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCC CGGTACTCGA TCGGCTCTGG GTGTATCTTT CGGCGAGCCC GCTGCTGTAT 
TTGCTGGTGA CCCTGCTGGC TTTCATCGCC GCGACTCGCA TCAATCGACG CCTGGGCGGA
ACGCCGTTCC TGCATCCGGT GATAATCGCC ATCGTGCTGC TCATCGGCTT CCTGAAGCTC
ACTCGCACCG ATTACGCCAC CTATTTCGAG GGCGCGCAGT TCATTCATTT TCTCCTCGGC
CCGGCGACCG TGGCATTGGC GATTCCCCTC TATGACTATC GCGAGCGTGT CAGGCGCATG
TTGCTGCCGA TCCTGCTGGG GTGCGGCGCA GGTATCGTGA CGGCGGTCAC GTCCACCGTC
GGGCTCGCCA TGCTGATGGG GGCCAGCCGC GAAACCGTGC TGACGCTGGC GCCTCGCTCG
GTGACGTCAC CCATTGCCAT GGGGATCGCC GAAAAGCTGG GCGGCATTCC TTCCCTGGCG
GCGGGGCTGG TGCTGCTGAC GGGCTCTGTG GGCTGCGCCC TGGGGCCGGT GATCTTTCGC
CTGGTCAAGG TGCGTGACCC GAGCGTCCAG GGGTTTGCCA TGGGCCTGGC GGCGCACGGC
TTCGGCACGG CGCATTCGTT TTCTTCCATC GGTGCCGTGG CCGGTGCCTT CGCGGGCTTG
TCCATGGGAC TGACCGGGCT TTTCACGGCG TTCTTGTTGC CGCCCATCGT GCACCTGTTC
GGGCTCTAG
 
Protein sequence
MNLPVLDRLW VYLSASPLLY LLVTLLAFIA ATRINRRLGG TPFLHPVIIA IVLLIGFLKL 
TRTDYATYFE GAQFIHFLLG PATVALAIPL YDYRERVRRM LLPILLGCGA GIVTAVTSTV
GLAMLMGASR ETVLTLAPRS VTSPIAMGIA EKLGGIPSLA AGLVLLTGSV GCALGPVIFR
LVKVRDPSVQ GFAMGLAAHG FGTAHSFSSI GAVAGAFAGL SMGLTGLFTA FLLPPIVHLF
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