Gene Csal_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1793 
Symbol 
ID4028593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2040163 
End bp2040546 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content64% 
IMG OID637966982 
ProductLrgA 
Protein accessionYP_573844 
Protein GI92113916 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTCA TTCTAGGTAT GAGCATCCTG CTGGGGTGCC AGTTCATTGG CGAAATCCTG 
GTGCACGCGC TGCATTTGCC CGTGCCCGGT CCGGTGCTGG GCATGGCCGT GCTGCTCGTG
GGGTTGATGG TGAACGGGCG AGTGCCCGCG GGCCTGCGCA CCAGCGGCGA AGGCTTGTTG
CGATATCTGA CGCTGCTGTT CGTGCCCGCC GGGGTCGGGA TCATGGTGCA CTTCGGTCTC
ATCGAGGCCG ACTTCTGGCC GATCGTGGTG ACGCTGGTGG TATCGACAGC CCTGACACTG
GCCGTGACCG CGAAAGTGAT GGAGCGCTTG ACCCGATCGA CGCCCAGGGA TCCTCGCGAC
GCGCTGCGGG AGGATCGGTC ATGA
 
Protein sequence
MPLILGMSIL LGCQFIGEIL VHALHLPVPG PVLGMAVLLV GLMVNGRVPA GLRTSGEGLL 
RYLTLLFVPA GVGIMVHFGL IEADFWPIVV TLVVSTALTL AVTAKVMERL TRSTPRDPRD
ALREDRS