Gene Csal_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1779 
Symbol 
ID4028306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2023783 
End bp2024409 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID637966967 
Productisochorismatase hydrolase 
Protein accessionYP_573830 
Protein GI92113902 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.548107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTTA CCTACAACCG ACTCGACAAG AATGATGTAG CCCTGCTGAT GGTGGACCAT 
CAAGCTGGTC TGCTCTCTCT GGTGCGCGAC TTCAGCCCGG ACGACTTCAA GAACAATGTC
CTGGCCCTGG CCGATATCGC CAAGTTCTTC GATATCCCCA CCATCCTCAC CACCAGCTTC
GAGACCGGCC CCAATGGCCC CATCGTCCCG GAACTCAAGG AGATGTTCCC CCAGGCCCCC
TACTTCGCGC GTCCGGGACA GATCAACGCC TGGGACAACG AGGAGTTCGT TGCCGCCATC
AAGGCCACCG GCAAGAAGCA GCTGCTGATC GCCGGGGTGG TCACCGAGGT ATGCGTGGCT
TTCCCGGTGC TCTCGGCCCT GGAGGAGGGC TATGAGGTCT TCGTCGTCAC CGATGCCTCT
GGCACCTTCA ACCAGACCAC CCGCGACGCC GCCTGGGATC GCATGTCCCA GGCCGGTGCC
CAGCTGATGA CCTGGTTCGC CGTGGGCGGC GAGCTGCACC GCGACTGGCG CAACGATATC
GAGGGCTTCG GCGGCCTGCT GGCCGGCCAC CTGCCCGCCT ATGCCAACCT GATGCAAAGC
TATTCGCAAC AGAACCAGCT GGGCTAA
 
Protein sequence
MSFTYNRLDK NDVALLMVDH QAGLLSLVRD FSPDDFKNNV LALADIAKFF DIPTILTTSF 
ETGPNGPIVP ELKEMFPQAP YFARPGQINA WDNEEFVAAI KATGKKQLLI AGVVTEVCVA
FPVLSALEEG YEVFVVTDAS GTFNQTTRDA AWDRMSQAGA QLMTWFAVGG ELHRDWRNDI
EGFGGLLAGH LPAYANLMQS YSQQNQLG