Gene Csal_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1748 
Symbol 
ID4028275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1991791 
End bp1993107 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content67% 
IMG OID637966936 
Productmandelate racemase/muconate lactonizing enzyme 
Protein accessionYP_573799 
Protein GI92113871 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA TTACCCACCT GCAAGCACGC GACATCCGCT TTCCCACGTC ACGCCAGCTC 
GACGGCTCTG ACGCCATGAA CGAGGCGCCG GATTACTCGG CCACCTATGT CACGCTCACC
ACCGACGCCG ACGACGGCCT TCAGGGGCAC GGGCTGACCT TCACCATCGG GCGCGGCAAC
GATGTCTGCG TCATGGCCGT CGAGGCCCTG GCGTCGCGCA TCGTGGGTCG CGATCTCGAG
ACCATCACCG CCGACATGGG CACGTTCTGG CGCGACCTCA CCAGCGGCGA CAGCCAATTG
CGCTGGCTGG GACCGGAAAA AGGCGTCATG CACCTGGCCT CGGCCGCCAT CGTCAACGCC
GTGTGGGACC TGTGGGCGAA GCGTGAAGGC AAGCCGGTCT GGAAGCTGCT GGTGGACATG
ACGCCCGAGC AGCTGGTCCG CTGCCTGGAT TTCCGCTTCG TCACCGACGC CCTGACCCCG
CAGGAAGCCA TCGGCCTGCT CAAGCGCCGC GAAGCCGGCA AGGCAGAGCG CGAAGCGCAC
ATGCGCGCCG AGGGCTATCC CGGCTATACC ACCTCCGCCG GCTGGCTCGG CTATTCCGAG
GACAAGATGC GCCGCCTGGC GCGCGAGGCG CTGGCCGAGG GCTGGACGCA CTTCAAGCAG
AAGGTCGGCG GCAACCTCGA GGAAGACCGC CAGCGCGCGC GCATCCTGCG CGAGGAAATC
GGCTGGGAAC GGGCGCTGAT GATGGACGCC AACCAGATGT GGGAAGTCGA CGAAGCCGTC
GCCAACATGC GCGACCTGGC GGAATTCGAT CCGCTGTGGA TCGAGGAGCC CACCAGCCCG
GACGATATCC TCGGGCATGC CGAGATTCGC CGCCGCCTGG CCCCCATCGG CGTCGCCACC
GGCGAGCACT GCCACAACCG GGTGATGTTC AAGCAACTCC TGCAGGCCGG TGCCATCGAC
TATTGTCAGC TCGATGCCGC GCGTCTCGGC GGGCTCAACG AAGTGATCAT CGTCACGCTG
CTGGCCGCCA AGTACGACGT TCCCATCTGC CCGCACGGCG GCGGCGTGGG CCTGTGCGAG
TACACCCAGC ACATCTCGCT GTTCGATTAC ATCGCAGTCT CCGGCTCGCT GGACGGCCGC
ATTCTGGAAT ACGTCGACCA CCTCCACGAG CACTTCGTCG ATCCGGTACG GATCCGGCAA
GGGCGCTACC AGGTGCCCGA GGCGCCGGGC TACAGCATCA CCCTGCATGA CGACGCGCTC
GAGCGTCATC AGTACCCCGA CGGCGCGGCC TGGCAGGAGG GTTCGGCGGG CAATTGA
 
Protein sequence
MTTITHLQAR DIRFPTSRQL DGSDAMNEAP DYSATYVTLT TDADDGLQGH GLTFTIGRGN 
DVCVMAVEAL ASRIVGRDLE TITADMGTFW RDLTSGDSQL RWLGPEKGVM HLASAAIVNA
VWDLWAKREG KPVWKLLVDM TPEQLVRCLD FRFVTDALTP QEAIGLLKRR EAGKAEREAH
MRAEGYPGYT TSAGWLGYSE DKMRRLAREA LAEGWTHFKQ KVGGNLEEDR QRARILREEI
GWERALMMDA NQMWEVDEAV ANMRDLAEFD PLWIEEPTSP DDILGHAEIR RRLAPIGVAT
GEHCHNRVMF KQLLQAGAID YCQLDAARLG GLNEVIIVTL LAAKYDVPIC PHGGGVGLCE
YTQHISLFDY IAVSGSLDGR ILEYVDHLHE HFVDPVRIRQ GRYQVPEAPG YSITLHDDAL
ERHQYPDGAA WQEGSAGN