| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1747 |
|---|
| Symbol | |
|---|
| ID | 4028274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1990520 |
|---|
| End bp | 1991584 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637966935 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_573798 |
|---|
| Protein GI | 92113870 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA CCACAACGAC ACGCTTCGTT TCCGTCGTGG GCGGCGCCGT TCTCGGCTTG
ACCGCGTTCA GCGCCTCTGC GGCGACCGAA ATGCCTCCGC TGCCGGAGGT CAAAGGTGAG
AAGGTCGAGG CCGACGGCAA TTTCAAGATC AAGTTCAGCA TCGGCACCAC GGAATCCGGC
GCGCAATACC GCGGCCTCGA ATATTTCGAG AAGATCGTCG AACAACGCAG CGACGGCAAC
ATTCAGGTCG AACTGTTCCC GGGCGCCCAG TTGGGCGATG ACCGCCAGGC CACCAGTGCG
CTCCAGTCGG GCACGCTGGA AATGACCATG CCGTCGACGT CTCCGCTGGT GAACATGTTC
CCGGAATTCG CGGTGTTCGA CCTCCCCTTC CTCTTCCCGC AGCCTGAAAT GGCGGATGCG
GTACTCGACG GCGAGATCGG CCAGCAGATG CTCGAAGACG CGTCCTCGCA AGGCCTGGTG
GCGATCGGCT GGGGTGAAAA CGGTTACCGT CAGCTGACCA ACAGCCAGCA CCCGGTCGAG
GAGCCGGCGG ACCTCGACGG CCTGAAGATC CGTACCATGG AGAACGATCT CCACCTGGAT
ATCTGGCGCA CCCTGGGGGC CAACCCGACG CCGATGTCCT TCGCGGAGCT GTTCACGGCG
CTCGAGCAAG GGGTCGTCGA CGGTCAGGAA AATCCGTGGA TCACCATCGA ATCCTCCAAG
TTCAACGAGG TGCAGGACTA CGCCACCGAA ACCAACCACG TCTACACACC GTTCATCACG
CTGGTCTCCG CGCGTTTCTG GGATCGTCTG CCGGAAGACT ACCAGCAGCT GCTGCGCGAC
GCGGCCACCG AGATGGGCGA CTATCAGCGC CACGTCAGCC GCACGCTGAA CGATCAGATC
AAGCAGGATC TGAAGGATTC CGGCATGCAG ATCACCGAGC TGACGCCGGA GCAGGTCAAG
GTCTTCCAGG ACAAGCTGGA GCCGGTGTAT GAAGACTGGC GCGACCAGAT CGGCGGCGAG
CTGATCGACG ATATCCGCGC CCAGGTGGAA CAAGCGCAAG AGTAA
|
|---|
| Protein sequence | MTTTTTTRFV SVVGGAVLGL TAFSASAATE MPPLPEVKGE KVEADGNFKI KFSIGTTESG
AQYRGLEYFE KIVEQRSDGN IQVELFPGAQ LGDDRQATSA LQSGTLEMTM PSTSPLVNMF
PEFAVFDLPF LFPQPEMADA VLDGEIGQQM LEDASSQGLV AIGWGENGYR QLTNSQHPVE
EPADLDGLKI RTMENDLHLD IWRTLGANPT PMSFAELFTA LEQGVVDGQE NPWITIESSK
FNEVQDYATE TNHVYTPFIT LVSARFWDRL PEDYQQLLRD AATEMGDYQR HVSRTLNDQI
KQDLKDSGMQ ITELTPEQVK VFQDKLEPVY EDWRDQIGGE LIDDIRAQVE QAQE
|
|---|
| |