| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1723 |
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| Symbol | |
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| ID | 4028831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1962132 |
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| End bp | 1964333 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637966911 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_573774 |
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| Protein GI | 92113846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0254567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCGC GTCGGCGCGG TGCGAGTGAC TGCCAGTACG ACGCCTGTGC AACGAGACGA
ATCGGGGCAC GGGGTTTGCT CGCGACAGCC GCTGGGATAG GCTTGTCACT CGTTTACATT
CCTGACCGAC CCCGGCGCCG CACAATGCGA AGATGGCCCT ATCGTGCAAG ACGGTTTTCC
ACGCTACTGC CCAGGATATT GCCCAGAACG CTGCTTCCGG GCACGCTATT CGGTCGTCTT
GTCATGGGCA TCGGTCTGGG CTGGTTGGTG CTGGTGGCTG CCATTCTCTG GGTATCGCTG
CGTGGCGGCA GCGATCTGGC GGACGAGATC AACCGTTCGC ACCTGGATTA TGAAGCCTCG
CTGATCGCGC GCGACATTCA GCAGGCGATC ACGTTGCGGC TCGATACGCT GGAAACCCTT
GCGACCGCCC AGGCCGGGCA ATTGCGGGGA CGCGGTGAAT CCCTCGACGA GGCGAGTGTC
GAGGATGTGC AACGGCGTCT GAGCCGTCAC TCGGCCTTGC TCGAGCTGTT CGATTCCGCC
TTCGTGACCG ACGCGCAAGG CGAGGTCAAG GCTTTCATGC CGTCGTTGTC GGGCGCCGTG
GGCCTGAATG TCGCCGAGCG TGAGTACTTT CGCTTCCTCC AAGAGGTCGG GCGCCCCTTC
GTGGGGCGTC CGATCATCAG CAAGCTGCAC GATCGACGTC CCCTGGTGGT GATGGGCGTG
CCCCTGCGCG ACGACGAAGG CGACTTCGCC GGCATGCTGG GGGGCGTGGT CAACCTGCGC
GATGGCCGCT TCTTTCTCGA TCTGCGCAGC CTGCGTATCG GCGAGCGGGG CTATGCGGTG
TTGATGACCA GCGATGGAAC GGTACTCAGT CATCCCGATC AGAACCGGAT CATGCAGCAA
ACGCCGGCGG CATGGGAGGG GCCGTTGCTC GAGAAGGCGC TGGACGGCTG GCAGGGCACG
GGTATCGGGC GACTGGTCAA TGGCGAGTCG GCGTTGATGA GCTTCCATCA GGTCTGGCAG
CCGGGCTGGG TCGTTGGCGT CTTCCTGCCG GAAAGCCAAG TGCGGCAGCC GATCCTGGAT
TACGTGCGTC GCCAGGGGTG GGTGGCCGCG GTGGTGGTAC TGTCGATGCT GCCGCTGTTG
TGGTGGCTAC TGCGCCTGGG ATTGTCGCCC TTGCGGCGCC TGGCCCGGCA GATCGCGCTG
GTGGGGCAGG GCGAGATTTC GCGCATCACC CTGGATACGT CGCTGGATGA GTTGCGCCGT
ATCGCCCGGA CGTTCAACGA TGTCGAGCAT GAGCGCGGCC TCGAGCGCGC CGAGCGCCAT
CGTCGGCAGG CGTATCTCGA CGCGGTGCTG CGTTCCTCGC CGTTGCCGAT GTTCCTGGCG
AGCCTCGAGG GCCGCATCAC CTATGTCAAT CCGGCCCTGG AGAGTCTGAC GGGGCTGTCG
ACGCCGGCCT TCCAGCGCCG CGAATGGCTG CGCCGCCTGC ACCCCGAGGA CCGTCCGGTG
CTGTTCGCGC TGTGGCGTCA TGCGGTGAAC GGCGGTCACG AGCTGCACCG ACAGCTGCGC
TTCGCCTGCG GCGAACGCGG CATGATGTGG CTGGAGCTCT ACACCAGCCA GGTCATGAAC
GATGGCCGGC CCCAGGGTGT GGTGGGCTTC GTCAAGGACA TCACTCACCT GCGTGAACAG
CAGAAACGCC AGCTCTGGGA GGCCGAGCAC GATCCGCTGA CGGGGCTGCT CAACCGGCGT
GGCTTCGACC GACGCCTGAA CGATACCTTC ATGGCCTTCA AGGAGCGCGG CGATGTGGCA
GCGCTGATCC TGTTCGACCT GGACAGCTTC AAGCCCATCA ACGACGACGG CGGTCATGCC
CTGGGCGACG AGATGCTCGA TGCCATCGCC CGTTGCCTGG AAGGCTGCGT GCGTCGCGAC
GACCATCTGG CCCGGCTCGG CGGCGACGAG TTCGCGATTC TGCTCCCCGG CTGCGGCCAC
CAGCAGGCCG TGCGTATCGC CGACAAGGTA CGCCATGCGG TGAGCGAGCT TTCCGTGGTG
CAAGATGGCA AGCGTTACCG CGTCACGGCG AGCCTGGGTG TCTCGTGTCT GGGGAGCGAC
GATGACGAGG CCCAGGCCGT GGTCAAGCGC GCCGACGCGG CGAGCTACGA GGCCAAGGCG
CAGGGCAAGA ATCGGATGGT GGCCGATGCG CGCTGCGGAT GA
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| Protein sequence | MPSRRRGASD CQYDACATRR IGARGLLATA AGIGLSLVYI PDRPRRRTMR RWPYRARRFS
TLLPRILPRT LLPGTLFGRL VMGIGLGWLV LVAAILWVSL RGGSDLADEI NRSHLDYEAS
LIARDIQQAI TLRLDTLETL ATAQAGQLRG RGESLDEASV EDVQRRLSRH SALLELFDSA
FVTDAQGEVK AFMPSLSGAV GLNVAEREYF RFLQEVGRPF VGRPIISKLH DRRPLVVMGV
PLRDDEGDFA GMLGGVVNLR DGRFFLDLRS LRIGERGYAV LMTSDGTVLS HPDQNRIMQQ
TPAAWEGPLL EKALDGWQGT GIGRLVNGES ALMSFHQVWQ PGWVVGVFLP ESQVRQPILD
YVRRQGWVAA VVVLSMLPLL WWLLRLGLSP LRRLARQIAL VGQGEISRIT LDTSLDELRR
IARTFNDVEH ERGLERAERH RRQAYLDAVL RSSPLPMFLA SLEGRITYVN PALESLTGLS
TPAFQRREWL RRLHPEDRPV LFALWRHAVN GGHELHRQLR FACGERGMMW LELYTSQVMN
DGRPQGVVGF VKDITHLREQ QKRQLWEAEH DPLTGLLNRR GFDRRLNDTF MAFKERGDVA
ALILFDLDSF KPINDDGGHA LGDEMLDAIA RCLEGCVRRD DHLARLGGDE FAILLPGCGH
QQAVRIADKV RHAVSELSVV QDGKRYRVTA SLGVSCLGSD DDEAQAVVKR ADAASYEAKA
QGKNRMVADA RCG
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