Gene Csal_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1713 
Symbol 
ID4028821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1949292 
End bp1951487 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content64% 
IMG OID637966901 
Productprotein-tyrosine kinase 
Protein accessionYP_573764 
Protein GI92113836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000917303 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCA ATGTACCTGC CCCACAAACC AGCAAGACCG ACAACGACAT GGAGCTGGGA 
CGCATCCTGG GCCTGTTGTT CGACGCCAAG GGACTGGTAA TCAGTCTGAT CGTGCTGTTC
GCACTCGTGG GGGCGGCGTA TGCCTTCTTC GCGACGCCTA TCTTTCGGGC CGACTCACTG
GTCCAGGTGG AAACCAAGAC CCCCAAGAAT CCACTCGCGG ATGCCACGGC GTCCGCCATG
ATGCCGCAGT TGCCGCCCTC GCGCGCGGAA ATGGAAATCA TGAAATCGCG CATGGTGCTG
GGCCGCGCGG TGGATCTGCT CAACCTCGAC ATCCGCGTCG AGCCGGTGCG CGTGCCGGTC
ATCGGCGGGT TCCTGCAGCG CCACCAGATC GCCGCACCCG CGTTCGCCCA GGACTGGGGC
TACGCCTGGG GCGACGACCA TATCGAACTC GCCGGCATGC CGGTGGCCGG TGAGTATCTG
GGCAAGACCT TCACTCTCGA AGTGCTCGAC GAGACCCGCT ATGCCTTGCA TTACCGGGGC
GAACGCCTGG GCGAGGGCAG CGTCGGCGAG GAAGCGAGTT TCCTCGGTGG TGCGGTAGGC
GTTGAAGTCG AGTCGATCGC GGCGGCACCG GGTGCGACCT TCAAGTTGAC CCACGCCCAG
CGCGTGGTGG CTGTCGACCA ATTGCGCGAC AACTTCGGCG TCGCCGAGCA AGGCAATGGC
ACGGGCATCA TCTCCTGGAG CCTGACCGAT CCATCGCCGG CTCTGGCCGA GCGGGTGCTG
GCCACCATCG GCGATATCTA CGTCACCCAG AACATTCAGC GTCAGTCCGA GGAGGCGCGC
AAGAGCCTGG AATTCTTGAG CAAGCAGGTG CCGGAGGTGC GTGGCGAACT CGCCGGGGCC
GAGCAGCAGC TCAATGCCTA CCGCTCCGAG CACGACAGCG TGGATATTTC CATGGAGACC
AAGTCGGTGC TCGACCGCGT GGTCAACCTG GAAAGCCAGC TCAACGAGCT CGAATTCTCC
GAGGCCGAGA TCTCGCGGCG CTTCACGCCC AGCCACCCGA CCTACGCGGC CCTGCTGGAG
AAGAAGGCAC AGCTCAAGAG GGAGCTCAAC ACGTTGGAAG AGCGCATCAA CGGCATGCCG
GAAACCCAGC AGGAAGTGCT GCGCATGCAG CGCGATGTTT CGGTCAATCA GGCGATCTAC
GTGCAGCTGC GCAACAAGGT GCAGGAAATG CAGATCGCCG AGGCCAGCAC GGTGGGCAAC
GTTCGGGTGC TGGACGACTC CGAGTCGTTC CCGCGTCCGG TCTCGCCCAA CAAGATCATG
ATCATCGCCC TGGCGACCAT ACTGGGCGCG GCCTTCGCAG TGGCAGTGGT GATGCTGCGC
GCGATGTTCA ACCGCGGTCT GGAAAGCCCC GACCAGCTCG AACAACTGGG CTTGCCGGTC
TACGCCATCG TGCCCAAGTC CGACGATCAG AACCGGCTCA GCCGCCGCAT TCGTCGCGGC
GGGCGCTCGC AGAGCGTGCC GGCGGGGCTT TTGGCCTGGC ATCGTCCGCT GGATGTCTCC
ATCGAGGCGC TGCGCAGCCT GCGTACCAGC CTGCACTTCG CGATGCTGGA CAGCACGGAC
AACCGCTTGA TGATCACCGG CCCCAGTCCG GCGGTGGGCA AGAGCTTCAT CACCGCCAAC
CTGGCGGCGG TATGCGCCCA GAACGGCCAG CGCGTGCTGG TGATCGACGG CGACATGCGC
AAGGGCCAGA TGCACAAGAT CTTCAAGGGC CCCTCCGAGG ATGGCCTGAG CGAGATTCTC
GCCGGCCGCC ATACGCTGGA AGAAATGGTG CGCCCGGTGG AAAGCATCGA GGGACTCGAG
TACCTGGCGC GCGGGGTGGT ACCGCCGAAT GCCTCGGAAC TGCTGGCCTC AGAGCGCTTC
ACCGAGCTCC TGGCCAAGGC CAGCGAGCGC TATGACCTGG TGATCGTCGA TTCGCCGCCG
GTGCTGGCGG TGACGGATGC CACGGTCATC GGCAAGCGCG TGGGCACGAC GCTGATGGTG
GCACGCTTCC AGCTCAATCC GCCCAAGGAA ATCGAGCTGG CGATGCGGCG GCTGGATACC
GGCGGGGTAC GCGTCAAGGG CGCGATCCTC AACGGCCTGG AGCGCAAGGC GGCCACGGCG
TACACCTATG GTTACTACAA CTATTCCTAC CGCTAA
 
Protein sequence
MNLNVPAPQT SKTDNDMELG RILGLLFDAK GLVISLIVLF ALVGAAYAFF ATPIFRADSL 
VQVETKTPKN PLADATASAM MPQLPPSRAE MEIMKSRMVL GRAVDLLNLD IRVEPVRVPV
IGGFLQRHQI AAPAFAQDWG YAWGDDHIEL AGMPVAGEYL GKTFTLEVLD ETRYALHYRG
ERLGEGSVGE EASFLGGAVG VEVESIAAAP GATFKLTHAQ RVVAVDQLRD NFGVAEQGNG
TGIISWSLTD PSPALAERVL ATIGDIYVTQ NIQRQSEEAR KSLEFLSKQV PEVRGELAGA
EQQLNAYRSE HDSVDISMET KSVLDRVVNL ESQLNELEFS EAEISRRFTP SHPTYAALLE
KKAQLKRELN TLEERINGMP ETQQEVLRMQ RDVSVNQAIY VQLRNKVQEM QIAEASTVGN
VRVLDDSESF PRPVSPNKIM IIALATILGA AFAVAVVMLR AMFNRGLESP DQLEQLGLPV
YAIVPKSDDQ NRLSRRIRRG GRSQSVPAGL LAWHRPLDVS IEALRSLRTS LHFAMLDSTD
NRLMITGPSP AVGKSFITAN LAAVCAQNGQ RVLVIDGDMR KGQMHKIFKG PSEDGLSEIL
AGRHTLEEMV RPVESIEGLE YLARGVVPPN ASELLASERF TELLAKASER YDLVIVDSPP
VLAVTDATVI GKRVGTTLMV ARFQLNPPKE IELAMRRLDT GGVRVKGAIL NGLERKAATA
YTYGYYNYSY R