Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1713 |
Symbol | |
ID | 4028821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1949292 |
End bp | 1951487 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966901 |
Product | protein-tyrosine kinase |
Protein accession | YP_573764 |
Protein GI | 92113836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000917303 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTCA ATGTACCTGC CCCACAAACC AGCAAGACCG ACAACGACAT GGAGCTGGGA CGCATCCTGG GCCTGTTGTT CGACGCCAAG GGACTGGTAA TCAGTCTGAT CGTGCTGTTC GCACTCGTGG GGGCGGCGTA TGCCTTCTTC GCGACGCCTA TCTTTCGGGC CGACTCACTG GTCCAGGTGG AAACCAAGAC CCCCAAGAAT CCACTCGCGG ATGCCACGGC GTCCGCCATG ATGCCGCAGT TGCCGCCCTC GCGCGCGGAA ATGGAAATCA TGAAATCGCG CATGGTGCTG GGCCGCGCGG TGGATCTGCT CAACCTCGAC ATCCGCGTCG AGCCGGTGCG CGTGCCGGTC ATCGGCGGGT TCCTGCAGCG CCACCAGATC GCCGCACCCG CGTTCGCCCA GGACTGGGGC TACGCCTGGG GCGACGACCA TATCGAACTC GCCGGCATGC CGGTGGCCGG TGAGTATCTG GGCAAGACCT TCACTCTCGA AGTGCTCGAC GAGACCCGCT ATGCCTTGCA TTACCGGGGC GAACGCCTGG GCGAGGGCAG CGTCGGCGAG GAAGCGAGTT TCCTCGGTGG TGCGGTAGGC GTTGAAGTCG AGTCGATCGC GGCGGCACCG GGTGCGACCT TCAAGTTGAC CCACGCCCAG CGCGTGGTGG CTGTCGACCA ATTGCGCGAC AACTTCGGCG TCGCCGAGCA AGGCAATGGC ACGGGCATCA TCTCCTGGAG CCTGACCGAT CCATCGCCGG CTCTGGCCGA GCGGGTGCTG GCCACCATCG GCGATATCTA CGTCACCCAG AACATTCAGC GTCAGTCCGA GGAGGCGCGC AAGAGCCTGG AATTCTTGAG CAAGCAGGTG CCGGAGGTGC GTGGCGAACT CGCCGGGGCC GAGCAGCAGC TCAATGCCTA CCGCTCCGAG CACGACAGCG TGGATATTTC CATGGAGACC AAGTCGGTGC TCGACCGCGT GGTCAACCTG GAAAGCCAGC TCAACGAGCT CGAATTCTCC GAGGCCGAGA TCTCGCGGCG CTTCACGCCC AGCCACCCGA CCTACGCGGC CCTGCTGGAG AAGAAGGCAC AGCTCAAGAG GGAGCTCAAC ACGTTGGAAG AGCGCATCAA CGGCATGCCG GAAACCCAGC AGGAAGTGCT GCGCATGCAG CGCGATGTTT CGGTCAATCA GGCGATCTAC GTGCAGCTGC GCAACAAGGT GCAGGAAATG CAGATCGCCG AGGCCAGCAC GGTGGGCAAC GTTCGGGTGC TGGACGACTC CGAGTCGTTC CCGCGTCCGG TCTCGCCCAA CAAGATCATG ATCATCGCCC TGGCGACCAT ACTGGGCGCG GCCTTCGCAG TGGCAGTGGT GATGCTGCGC GCGATGTTCA ACCGCGGTCT GGAAAGCCCC GACCAGCTCG AACAACTGGG CTTGCCGGTC TACGCCATCG TGCCCAAGTC CGACGATCAG AACCGGCTCA GCCGCCGCAT TCGTCGCGGC GGGCGCTCGC AGAGCGTGCC GGCGGGGCTT TTGGCCTGGC ATCGTCCGCT GGATGTCTCC ATCGAGGCGC TGCGCAGCCT GCGTACCAGC CTGCACTTCG CGATGCTGGA CAGCACGGAC AACCGCTTGA TGATCACCGG CCCCAGTCCG GCGGTGGGCA AGAGCTTCAT CACCGCCAAC CTGGCGGCGG TATGCGCCCA GAACGGCCAG CGCGTGCTGG TGATCGACGG CGACATGCGC AAGGGCCAGA TGCACAAGAT CTTCAAGGGC CCCTCCGAGG ATGGCCTGAG CGAGATTCTC GCCGGCCGCC ATACGCTGGA AGAAATGGTG CGCCCGGTGG AAAGCATCGA GGGACTCGAG TACCTGGCGC GCGGGGTGGT ACCGCCGAAT GCCTCGGAAC TGCTGGCCTC AGAGCGCTTC ACCGAGCTCC TGGCCAAGGC CAGCGAGCGC TATGACCTGG TGATCGTCGA TTCGCCGCCG GTGCTGGCGG TGACGGATGC CACGGTCATC GGCAAGCGCG TGGGCACGAC GCTGATGGTG GCACGCTTCC AGCTCAATCC GCCCAAGGAA ATCGAGCTGG CGATGCGGCG GCTGGATACC GGCGGGGTAC GCGTCAAGGG CGCGATCCTC AACGGCCTGG AGCGCAAGGC GGCCACGGCG TACACCTATG GTTACTACAA CTATTCCTAC CGCTAA
|
Protein sequence | MNLNVPAPQT SKTDNDMELG RILGLLFDAK GLVISLIVLF ALVGAAYAFF ATPIFRADSL VQVETKTPKN PLADATASAM MPQLPPSRAE MEIMKSRMVL GRAVDLLNLD IRVEPVRVPV IGGFLQRHQI AAPAFAQDWG YAWGDDHIEL AGMPVAGEYL GKTFTLEVLD ETRYALHYRG ERLGEGSVGE EASFLGGAVG VEVESIAAAP GATFKLTHAQ RVVAVDQLRD NFGVAEQGNG TGIISWSLTD PSPALAERVL ATIGDIYVTQ NIQRQSEEAR KSLEFLSKQV PEVRGELAGA EQQLNAYRSE HDSVDISMET KSVLDRVVNL ESQLNELEFS EAEISRRFTP SHPTYAALLE KKAQLKRELN TLEERINGMP ETQQEVLRMQ RDVSVNQAIY VQLRNKVQEM QIAEASTVGN VRVLDDSESF PRPVSPNKIM IIALATILGA AFAVAVVMLR AMFNRGLESP DQLEQLGLPV YAIVPKSDDQ NRLSRRIRRG GRSQSVPAGL LAWHRPLDVS IEALRSLRTS LHFAMLDSTD NRLMITGPSP AVGKSFITAN LAAVCAQNGQ RVLVIDGDMR KGQMHKIFKG PSEDGLSEIL AGRHTLEEMV RPVESIEGLE YLARGVVPPN ASELLASERF TELLAKASER YDLVIVDSPP VLAVTDATVI GKRVGTTLMV ARFQLNPPKE IELAMRRLDT GGVRVKGAIL NGLERKAATA YTYGYYNYSY R
|
| |