| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1711 |
|---|
| Symbol | |
|---|
| ID | 4028819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1945959 |
|---|
| End bp | 1947386 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637966899 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_573762 |
|---|
| Protein GI | 92113834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA AGCATAAAGT GTTCGACCAG CTGGATCGTT CCGCGTGGGT GGGCAGCGAG
TCGTTATTGA CGTCTCGGGA AGCGCCCGAG GCGTTTTACG AACGTCGACA TTCGCGGTGG
TACGAGCAAT GCCTGATGGG CATGCCGTGT CAGTGGCTGA TCGGTCTGCC CGTGGTATTG
GCGGTCCCGG CACTGGTGAC GCATGGCGTG GGCTTCTGGC GGGCGATGCC GCCTGCCCTG
GAAACGACGC TCTGGGCCAT CGCGGTGGCC TTCGCGGTAT CGCTGTTCGT GTTGCAGCGC
TTGACCCGAT TTCCCGGCAC GCAGGCCTCG GTGTACGTGC TGCCGGTGGT GACGGTGGTC
TACGCCCTGG TGCTGGCCGT GCTGATGAAT GCCTATGCGT ATCAGGTACC GGTCTTCCTG
GGCGGTTATG CGGTCAGCGT GCTGTGGTTC TTCGCCGGGT ATGCCTGGTT GCGGCGCTTT
CAACGACCCT TGCTGGCGGT GGTCCCGGTG GGCGAGGCCA AGCGCCTGAG CCAGGCGGAA
GGCGTCGATC TCACCCTGCT GTCATCCCCC AACCTGAATG GCCTGCGCGT GGACGGCGTG
GTGGCGGATC TGCATAGCTT CTCGCCGTTG CCGGGCGAGG TGCTGCAGCC CGCCGACGAG
TTGCGCCAGC GCGATAACGC GAGCTCGGTG TCGGCCCAGA ATGCCCAGTG GGCACGTTTT
CTCACCAAGT GCACCTTGCA TGGCATTCCC GTCTATCAGA TCAAGCAGCT CGACGAGTCG
CATACCGGGC GCGTGCACCT CGATCATCTG GCGGAGACCG AGTTCACCGC GTTGACGCCG
TCGCCGCTGT ACAGCCTGCT CAAGCGAGGC ATGGATCTGG CCGGTGCACT GCTGCTACTG
CCGCTATTGG CACCGATCAT GCTCGCCACG GCGTGGGCGA TTCGCCGCGA CAGCCCGGGG
CCGGCGTTGT TCGTGCAGTG GCGAATGGGC CATCGCGGCC GGCCGTTTCG CATCTACAAG
TTCCGCAGCA TGTACAGCGA CCAGCGCGGC AAGGGCTTCA CCTCCGGCGA CGACGACCCG
CGCATCACGC CGGTGGGGAG GGTGATCCGC AAGTACCGCC TGGACGAGCT ACCGCAACTG
CTCAACGTGC TCAAGGGCGA CATGAGTTTC ATCGGCCCGC GCCCGGAGTC CATGGACCTC
TCCATGTGGT ACGAGAAGGA CGTCCCATTC TTCAGTTATC GCCATGTCGT CAAGCCCGGG
ATCTCGGGCT GGGCGCAGGT GGAGCAGGGC TATGCCGCCG AGGTCGATGG CATGACCGTG
AAGCTGCAGT ACGACTTCTA CTACATCAAG CATTTCTCGC TATGGCTCGA CCTGCTGATC
GTGTTCCGCA CCTTGAAGAC GATCGGCACC GGTTTCGGCG CTCGCTGA
|
|---|
| Protein sequence | MFDKHKVFDQ LDRSAWVGSE SLLTSREAPE AFYERRHSRW YEQCLMGMPC QWLIGLPVVL
AVPALVTHGV GFWRAMPPAL ETTLWAIAVA FAVSLFVLQR LTRFPGTQAS VYVLPVVTVV
YALVLAVLMN AYAYQVPVFL GGYAVSVLWF FAGYAWLRRF QRPLLAVVPV GEAKRLSQAE
GVDLTLLSSP NLNGLRVDGV VADLHSFSPL PGEVLQPADE LRQRDNASSV SAQNAQWARF
LTKCTLHGIP VYQIKQLDES HTGRVHLDHL AETEFTALTP SPLYSLLKRG MDLAGALLLL
PLLAPIMLAT AWAIRRDSPG PALFVQWRMG HRGRPFRIYK FRSMYSDQRG KGFTSGDDDP
RITPVGRVIR KYRLDELPQL LNVLKGDMSF IGPRPESMDL SMWYEKDVPF FSYRHVVKPG
ISGWAQVEQG YAAEVDGMTV KLQYDFYYIK HFSLWLDLLI VFRTLKTIGT GFGAR
|
|---|
| |