Gene Csal_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1707 
Symbol 
ID4028815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1939604 
End bp1940536 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID637966895 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_573758 
Protein GI92113830 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.938298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG TTGGCATGAA CACAGATGAC ATGAACATCG TCGTGATCGG TTTAGGACAG 
ATGGGCGGCA ACATGGCGAT GACCCTGCAT GCCGCCGGTT TCACCGTCAC GGGGACGGAC
GTCGCCGATG CGGCGCGGGA CAACCTGGCG GCCCGCGGGC TTTCCGTCAC GCGCCTGGAC
GCCCTGCCCG AGGCTGACGT CTACCTGCTC TCGCTGCCCA CCTCGGCCCA TGTCCGCGAG
GTCATCGAAA CCTCGCCCGG ACTCCTGCAG CGGGCCCCGA AGGGCAGCGT CATCGTCGAT
ACCTCGACCA GCGACCCGGC CGTCACCCGC GAGCTGGCCG GAAAGGTGGT CGAGGCTGGC
CTCGAATGGC TCGACGCGCC GGTGAGCGGT GGCCCGGCGG GCGCGGCGTC CGGCGCCCTC
GGCATGCTAC TGGGCGGCGA GTCGGCCACC ATCGAACGGC TCGCTCCCAT GCTCGAGGCG
ATGTCGGCGC GCCATACCCA CGTCGGCCCG GCGGGCAGTG GCCATGTGGT CAAGCTGGCC
AACAATTATC TCTGCGCGGC CCACCTGCTC ACCACGGCCG AGGCCGTGAC CCTGGCGGCC
CGCGCCGGCG TCGACCCGGC CGCCTGTCTG GCCGGGTTGA ACAGCGGCTC CGGGCGCAGT
GCCGTCAGCG AGGTCAACTT CCCCAAGTGG ATTCTCTCCG ACGCCTTCGA CTCGGGATTC
ACCACCGGCC TGATGCGCAA GGACCTGCGC CTGGCACGCG ATGCCGCCAG CAACATGGGG
CTGCCGCTGG AACTGCTGGA ACGGGTCGTG GCGCGCTGGC ATGACGACTC CGCCGGCCTG
CCCGACGCGG CCGACTTCAA TCGCATCACC GACACCATCC TGGCCCAGGC ACGGACAGAT
GCCCCCTTCC CGAATCAGGA GGAAACGCAA TGA
 
Protein sequence
MNKVGMNTDD MNIVVIGLGQ MGGNMAMTLH AAGFTVTGTD VADAARDNLA ARGLSVTRLD 
ALPEADVYLL SLPTSAHVRE VIETSPGLLQ RAPKGSVIVD TSTSDPAVTR ELAGKVVEAG
LEWLDAPVSG GPAGAASGAL GMLLGGESAT IERLAPMLEA MSARHTHVGP AGSGHVVKLA
NNYLCAAHLL TTAEAVTLAA RAGVDPAACL AGLNSGSGRS AVSEVNFPKW ILSDAFDSGF
TTGLMRKDLR LARDAASNMG LPLELLERVV ARWHDDSAGL PDAADFNRIT DTILAQARTD
APFPNQEETQ