Gene Csal_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1704 
Symbol 
ID4028542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1936574 
End bp1937497 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID637966892 
ProductLysR family transcriptional regulator 
Protein accessionYP_573755 
Protein GI92113827 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.407381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCC CCCACCAGCG GCTAGTGTAC TTCCAGGTAA CGATCGAGGC GGGCTCGGTG 
CGTCAGGCGG CGGCGCGGCT GGACATTGCG CCGTCGGCGG TCAGTCGTCA GCTTTCCTTG
ATCGAGGAGG CGCTGGGCGC GCCGCTGCTG GAGCGCTCGC GGCAAGGCGT GGTGCCGACA
CCGGTGGGGG AGATGTTGCT GGATTACTGC CGCAAGCGCG CGGCACTCGA CGATCGTTTC
AGCGAGACGC TGGATGCCTA CCAGCGGCTG GAAACCGGTC ATCTCTCGCT GACGGTCGGG
GAAGGCTTCG TCGGGGATCT GCTCGATACG CCGTTGCGCA CCTTTACCGA GCGCTATCGT
GGGGTGCGCC TGGATGTGAA CACCGGCAGT ACCAGCGACA TCATCGAAGC GGTGGTCGAG
GACGAGGCCC ATATCGGCTT GATGTACCAC GAGCGGCTGC ATCCGCAACT GCGTTTCTGG
CATTCCAGCC GTCAGCCGTT GGTGGCGTTG ATGTCGCCCT CGCATCCCCT GGCGGCTGTC
GAGAACGAAC TGCCTCTCGC CACGCTCAGC GAGCATCCCA TGGCGTTGTG GCGCACCGGC
CACGGAGTGC GTCAGCTGGT CGACGAGGGC TTTCGCGAGG CGGGGCTGGG GCAGCACGTC
ACGATGCAGA CCAACTCGCT TTCGGTGCTG CTGCATGCGG CCAGGTCGGA GCTCACCCTC
ACGCTGCTGC CGGCCTTCGC GGCCGCCCGG GAGCTGGAGG ACGGGGCGCT GGTGGCGCGT
GCCGTCGATT GCGAACGCTT TCGCCAGGCG CATGCGCACA TCATCACCCG GGTGGGGCGG
CGCATGCCGA AGGCGGGGCT GCAGCTGTTG CGCCACCTGG AGCGCTGGAT GCGGGCGTTC
AAATCAAGGC TAGTTTCGGG TTGA
 
Protein sequence
MDIPHQRLVY FQVTIEAGSV RQAAARLDIA PSAVSRQLSL IEEALGAPLL ERSRQGVVPT 
PVGEMLLDYC RKRAALDDRF SETLDAYQRL ETGHLSLTVG EGFVGDLLDT PLRTFTERYR
GVRLDVNTGS TSDIIEAVVE DEAHIGLMYH ERLHPQLRFW HSSRQPLVAL MSPSHPLAAV
ENELPLATLS EHPMALWRTG HGVRQLVDEG FREAGLGQHV TMQTNSLSVL LHAARSELTL
TLLPAFAAAR ELEDGALVAR AVDCERFRQA HAHIITRVGR RMPKAGLQLL RHLERWMRAF
KSRLVSG