Gene Csal_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1681 
Symbol 
ID4028693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1908964 
End bp1910061 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID637966869 
Productlipopolysaccharide biosynthesis 
Protein accessionYP_573732 
Protein GI92113804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATGG AATACGCTCG TCATGACGAT GACGAGATCG ACTTATCTCA ACTTCTCAAT 
CACCTGATCG ACGGCTGGTA CTGGATCGTG GGGTGCGTGG TGGCAGCCTT GGTGCTGGCG
GGCGCGTATC TCGCCATGAC CACGCCCCAA TACGAAACCT CGTTTCGGGC CACGCCGGCG
GCATCGTCCA ATTTCGCTGG CATGAACCTG CTCTCAGGGT TCTCGGTCTC GCCGCAGGAT
GCCTACACCA CGCTGGGTAA CCGCCTGAGC AGTTTCCAGA ACTTCCAGGA GTACGTCAGG
TCTCATCGCG AGGCCTTCGT GATCCCCGAA GGCGCCTCGC TTGGGAGTCT CTTCACGAAC
CGACTCGACA TCACCGGCCT GACCTCCGAG GTCAATGGGG CCAGCGAGTT GAGTCTGACC
TACCGTTACC CCGAAGGTGA ATCGGGTCAC CGGATTCTCA ACGGCTACGT CAACGCCACC
GCCGAACAGG TCTGGAGCGA ACTCAAGAAC CGCTTCGCCC GGGCCAACCA GGCCAAGATC
GCGGCCCTCA ACACACGTCT GCAGGTCGGT GAGGACAAGC TGCTCGCCGA GCGCGAGCAC
CGCCTGTTCG CGCTGGACAA CGCCATCAGC ACTGCACGGG CCCTGGGCAT CGAAGCGCCC
ACTACGCCCC AGGAATTCGG CCAGCTCAAT CCCAATAAAG AAGTGATCTA CACCTCGCTT
TCCGGCGATG GCCTGCCGCT GTACTTCATG GGCTACAAGA CCCTCGAGGC CGAACGTGAA
ACTTTGAAAG GCAAACTGCA TGACGGCCTC AGCAACGGTA CGCTTCGCAA CATCCGCGAA
GAGCTCGAAC AGCGCCACCA AATTGCCGAC ATGCTCAAGA ACGATAGCTT CTATCCGCTG
GAAGAAGGCG TCTCCGAGCA TCCCGACGAG CGTGTGGTCA GTGTGATCGA ACGCGCCTAC
CCGCAAGACG CTCCCGTGAA GCCACGCTCC GCACTCGTGC TCGCGTTGGC CGTGATTCTC
GGTGGCATGC TGGGCGTGTT CCTGGTCTTC ATGAAGGCAG GGCTGGGGGC GGTGCTGCGG
CAGCGTCGTC AGGCGTAA
 
Protein sequence
MSMEYARHDD DEIDLSQLLN HLIDGWYWIV GCVVAALVLA GAYLAMTTPQ YETSFRATPA 
ASSNFAGMNL LSGFSVSPQD AYTTLGNRLS SFQNFQEYVR SHREAFVIPE GASLGSLFTN
RLDITGLTSE VNGASELSLT YRYPEGESGH RILNGYVNAT AEQVWSELKN RFARANQAKI
AALNTRLQVG EDKLLAEREH RLFALDNAIS TARALGIEAP TTPQEFGQLN PNKEVIYTSL
SGDGLPLYFM GYKTLEAERE TLKGKLHDGL SNGTLRNIRE ELEQRHQIAD MLKNDSFYPL
EEGVSEHPDE RVVSVIERAY PQDAPVKPRS ALVLALAVIL GGMLGVFLVF MKAGLGAVLR
QRRQA