Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1675 |
Symbol | |
ID | 4028687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1904107 |
End bp | 1905324 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966864 |
Product | major facilitator transporter |
Protein accession | YP_573727 |
Protein GI | 92113799 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.816846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAACCTG CCCGCCTGGA AAAGCGTAAC GTGGCCATTC TGGTCAGCAG TCAGATTCTG TTCATGGTGG CCTCGATCAC GGTCATGACG CTGAGCGGGA TGGTCGGCCT GCAGTTGAGC CCGACCTCTG GGCTCGCCAC GCTGCCCATT GCCATCTCGA TGCTGGGTAC GGTGGCCTCG ACCCTGCCGG CTTCGCTCTA CATGAAGCGC GTGGGCAGGC GCCGCGGGTT CATCACCGGC ACGATCCTGG GCGGCATCGC GGGTGGCTTG CTGAGTTTCG TGGCCATTGC CCAGCAGTCG TTCTGGCTGT TCTGCGTCGG CAACCTGCTG CTGGGGCTCT ACCAAGGATT CGCCATGTAC TATCGCTTTG CCGCTCTGGA CGTGGCGAGC CCTGCCTTTC GCAGCCGGGC GATTTCTTTC GTCATGGCGG GGGGCGTGGT GGCTGCGTTC CTCGGCCCCT GGAACGTCAG TGCCACGGCC GACTGGATCG CCGGCGTGCC GTCCGGTGGG CCTTACCTGG TGATCGCCAT TCTCGCCCTG TTGGCCACCG GCCTGCTGAC CCAGCTCAAG ATGCCCGCCA GTGAGGAACC GCAACCCGGC GAGACGTCTC GACCCATGCC GGTCATTGCC ACTCAGGCGG GTTTCATGGT CGCCTTGCTG GCCGGCGCGG TGGGCTACGC CATCATGACA CTGGTCATGA CGGCCACGCC GCTGGCCATG CGCGCGCATG GCTTCGGGAT GGAGCAGATT GCCTTCATCA TGCAGTGGCA TGTGCTAGGC ATGTTCGCCC CCTCCTTCGT GACCGGCAGC CTCATCGCCC GCTTCGGGAT ACCGCGCATG CTGCTGACCG GCACGCTCTT GATGGCCGGC ACGGCCCTGA TCAGCAATCT TGGCGTTAGC CTGGCCCATT TCTGGGTGGC CCTGGTACTG CTGGGTATCG GCTGGAACTT CCTGTTCGTG GGCGGCAGCA CCCTGCTCTC GGCCGCCCAT ACGGATGCCG AACGCGGCAA GGTACAGGGC ATCAATGATC TGGTCATCTT CTCCCTGGTC GCCCTCGGCT CTCTGATGTC GGGCGCATTG TCGTACCACC TTGGCTGGAA GGCGCTCAAT CTGGCGATGC TGCCCCCCAT TGTGCTGGTG GCCCTGGCCA CGCTCTGGTA TCGCTGGCAC GCCGCCGCGA AGCCTTCCAT CAGCCTGGCG CCTCAATCCA AGAAGTGA
|
Protein sequence | MEPARLEKRN VAILVSSQIL FMVASITVMT LSGMVGLQLS PTSGLATLPI AISMLGTVAS TLPASLYMKR VGRRRGFITG TILGGIAGGL LSFVAIAQQS FWLFCVGNLL LGLYQGFAMY YRFAALDVAS PAFRSRAISF VMAGGVVAAF LGPWNVSATA DWIAGVPSGG PYLVIAILAL LATGLLTQLK MPASEEPQPG ETSRPMPVIA TQAGFMVALL AGAVGYAIMT LVMTATPLAM RAHGFGMEQI AFIMQWHVLG MFAPSFVTGS LIARFGIPRM LLTGTLLMAG TALISNLGVS LAHFWVALVL LGIGWNFLFV GGSTLLSAAH TDAERGKVQG INDLVIFSLV ALGSLMSGAL SYHLGWKALN LAMLPPIVLV ALATLWYRWH AAAKPSISLA PQSKK
|
| |