Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1664 |
Symbol | |
ID | 4029126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1892482 |
End bp | 1894296 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637966853 |
Product | membrane protein-like protein |
Protein accession | YP_573716 |
Protein GI | 92113788 |
COG category | [S] Function unknown |
COG ID | [COG4655] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0012251 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCACC ATGCCGGGTC GGCTTCCGCC CGCGCCCAAC GCGGCGCCAT CGGTCTGCTC GCCATGGGCG TGCTCGGGCT GGTGATCCTG TGCCTGGTGC TGGCGCTGGA TGTCGGGCGG CTGTACTACG AAAAGGCCCG GCTCCAGAAA CTCGCCGATA CCGCCGCCAT GGAAGCGGCG GCGGCCCTGG CAAGAACGCA GGACATGAGC ACGTTGCGCG AGATGGCCGC CGCCAACCTG GCGCGCAGCG AGGGCGACGG CGCGGCGCTC ACCCTGCAAC GCGGCACGAT CGCGGTCGAC GATGGGATCA ACGTCTTCGT CGCCGAGGAG GCCCCCACCA GCGACGCGGT CCGGGTGGTG CTGCGCCAGT CGGTGCCGAC CAGCCTGATC GTCAATGTCG AACGTCTTTT CTCCGACCGG GACATCGAAG ACACGCGGAC GCTCAGCACC GCGTCGGTGG CGCGGCGCAC GCCCGTGGCC GCGCTCGCCA TGGGCACGCA GCTGTTGTCC GTCGACGGCG ATACGGCGTT GCTGCAACCC GTGCTGGCGG CGCTGGGGGC GGATCTCGAT CTCGGCCTGG TGGGCTACGA AGGCCTGGCG CGCACCCAGG TGACGCTGCT GGAACTGGCG CGCGAACTCT CCGGGGTCGG CGTCGATCTC TCCGCCGCGA GCATCGATGA CGTCCTGAAC ACGACGCTCA CGGTCGGCGA ACTGGCGGAC GCCAGCCTCA ATATCCTGCG TGGCGCGGGC AACGACGATG CGCTGGTGGG CCTGCAACCC GCCAATGGCG CCATCGGCCT GGGAGACGTG ATCGCCGCGC TGGAGAACTT CACCGGCGGG CTCACCGGCA AGGCGCTGGA TGTGCCCGTG CGGCTCGGCG ACCTGCTGGC GGTGGATCTC GAATCCCCCC AGCGGGAGAA CGCCTTGTTC GCCGGCATAG GACTCGACAA TCTGCTGAGC ACGGCCCTGA TGGCTGCCAA TCGAGACAGC GGCATCCATC TCGACGATCT CGACCTCAAT GTCGGGCAGT TGGCGTCGCT GGAGCTGGAT CTCGATATCA TCGAGCCACC GCAAATCGCC GTGGGACCGG TGGGGTGCGA AACGCCCGAC GTGGGGGCCT GCAGCGAATG GCGCAGCGAG GCGAAAACGG CCCAGCTCGA TCTCGATGTG AGCGCGGCGG TCGATGTCAT CGGCCTGGTA ACGCTGGATC TGGACCTGGC GCTTGAATCC GCCTCGGCAA GCGGCGGTAT CGAATCCGTC GTCCCCCTGG GCAACCAGCG CTACGACGTA GGCGTCCAGG CCCGCTCGGC GTTGCTGACG AGCACCGCCG AGGTGGAACT GAGCCTGCTG AAATTCGCCG ATGTGCTCTC TCTGAGCCTC GACAACAACG AAAGCAGCCA GACCCCCACC GCCGCCGGCA CGATATATCG CGGCACCCTG AATGATTGGC CTGAACGCAC CACGCTGAGC TTCGGCGAAG GCATCGGTAG CGTCTCCGGG CTGGTGGGGC CGCTGCTGAC GGAATCGAAC ATCGAACTGT CCCTGCTCGG TAGCGGTGAT GAACCGTGCA GCGGCCTGCT GGGGTGCCTG GGGCAGGGCA TCGAGGACCT GCTGAACGAG GCGTTGGACT CCGTGAGTGA CTTGCTGGCG GCGCTGACGG CAGGACTCGA CGAGGTCCTC GATAACGTGC TGGCACCGCT TGTCGATCCC TTGCTGGACG CGCTGGGGCT GCGACTCAAC GGCGTGGATG CCGACGTGCT CGGTGTGGGC TACGGCAAAG TCGAATTGAT CCGAGTGGGA GACCCCGATG CGTGA
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Protein sequence | MLHHAGSASA RAQRGAIGLL AMGVLGLVIL CLVLALDVGR LYYEKARLQK LADTAAMEAA AALARTQDMS TLREMAAANL ARSEGDGAAL TLQRGTIAVD DGINVFVAEE APTSDAVRVV LRQSVPTSLI VNVERLFSDR DIEDTRTLST ASVARRTPVA ALAMGTQLLS VDGDTALLQP VLAALGADLD LGLVGYEGLA RTQVTLLELA RELSGVGVDL SAASIDDVLN TTLTVGELAD ASLNILRGAG NDDALVGLQP ANGAIGLGDV IAALENFTGG LTGKALDVPV RLGDLLAVDL ESPQRENALF AGIGLDNLLS TALMAANRDS GIHLDDLDLN VGQLASLELD LDIIEPPQIA VGPVGCETPD VGACSEWRSE AKTAQLDLDV SAAVDVIGLV TLDLDLALES ASASGGIESV VPLGNQRYDV GVQARSALLT STAEVELSLL KFADVLSLSL DNNESSQTPT AAGTIYRGTL NDWPERTTLS FGEGIGSVSG LVGPLLTESN IELSLLGSGD EPCSGLLGCL GQGIEDLLNE ALDSVSDLLA ALTAGLDEVL DNVLAPLVDP LLDALGLRLN GVDADVLGVG YGKVELIRVG DPDA
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