Gene Csal_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1664 
Symbol 
ID4029126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1892482 
End bp1894296 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content67% 
IMG OID637966853 
Productmembrane protein-like protein 
Protein accessionYP_573716 
Protein GI92113788 
COG category[S] Function unknown 
COG ID[COG4655] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0012251 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCACC ATGCCGGGTC GGCTTCCGCC CGCGCCCAAC GCGGCGCCAT CGGTCTGCTC 
GCCATGGGCG TGCTCGGGCT GGTGATCCTG TGCCTGGTGC TGGCGCTGGA TGTCGGGCGG
CTGTACTACG AAAAGGCCCG GCTCCAGAAA CTCGCCGATA CCGCCGCCAT GGAAGCGGCG
GCGGCCCTGG CAAGAACGCA GGACATGAGC ACGTTGCGCG AGATGGCCGC CGCCAACCTG
GCGCGCAGCG AGGGCGACGG CGCGGCGCTC ACCCTGCAAC GCGGCACGAT CGCGGTCGAC
GATGGGATCA ACGTCTTCGT CGCCGAGGAG GCCCCCACCA GCGACGCGGT CCGGGTGGTG
CTGCGCCAGT CGGTGCCGAC CAGCCTGATC GTCAATGTCG AACGTCTTTT CTCCGACCGG
GACATCGAAG ACACGCGGAC GCTCAGCACC GCGTCGGTGG CGCGGCGCAC GCCCGTGGCC
GCGCTCGCCA TGGGCACGCA GCTGTTGTCC GTCGACGGCG ATACGGCGTT GCTGCAACCC
GTGCTGGCGG CGCTGGGGGC GGATCTCGAT CTCGGCCTGG TGGGCTACGA AGGCCTGGCG
CGCACCCAGG TGACGCTGCT GGAACTGGCG CGCGAACTCT CCGGGGTCGG CGTCGATCTC
TCCGCCGCGA GCATCGATGA CGTCCTGAAC ACGACGCTCA CGGTCGGCGA ACTGGCGGAC
GCCAGCCTCA ATATCCTGCG TGGCGCGGGC AACGACGATG CGCTGGTGGG CCTGCAACCC
GCCAATGGCG CCATCGGCCT GGGAGACGTG ATCGCCGCGC TGGAGAACTT CACCGGCGGG
CTCACCGGCA AGGCGCTGGA TGTGCCCGTG CGGCTCGGCG ACCTGCTGGC GGTGGATCTC
GAATCCCCCC AGCGGGAGAA CGCCTTGTTC GCCGGCATAG GACTCGACAA TCTGCTGAGC
ACGGCCCTGA TGGCTGCCAA TCGAGACAGC GGCATCCATC TCGACGATCT CGACCTCAAT
GTCGGGCAGT TGGCGTCGCT GGAGCTGGAT CTCGATATCA TCGAGCCACC GCAAATCGCC
GTGGGACCGG TGGGGTGCGA AACGCCCGAC GTGGGGGCCT GCAGCGAATG GCGCAGCGAG
GCGAAAACGG CCCAGCTCGA TCTCGATGTG AGCGCGGCGG TCGATGTCAT CGGCCTGGTA
ACGCTGGATC TGGACCTGGC GCTTGAATCC GCCTCGGCAA GCGGCGGTAT CGAATCCGTC
GTCCCCCTGG GCAACCAGCG CTACGACGTA GGCGTCCAGG CCCGCTCGGC GTTGCTGACG
AGCACCGCCG AGGTGGAACT GAGCCTGCTG AAATTCGCCG ATGTGCTCTC TCTGAGCCTC
GACAACAACG AAAGCAGCCA GACCCCCACC GCCGCCGGCA CGATATATCG CGGCACCCTG
AATGATTGGC CTGAACGCAC CACGCTGAGC TTCGGCGAAG GCATCGGTAG CGTCTCCGGG
CTGGTGGGGC CGCTGCTGAC GGAATCGAAC ATCGAACTGT CCCTGCTCGG TAGCGGTGAT
GAACCGTGCA GCGGCCTGCT GGGGTGCCTG GGGCAGGGCA TCGAGGACCT GCTGAACGAG
GCGTTGGACT CCGTGAGTGA CTTGCTGGCG GCGCTGACGG CAGGACTCGA CGAGGTCCTC
GATAACGTGC TGGCACCGCT TGTCGATCCC TTGCTGGACG CGCTGGGGCT GCGACTCAAC
GGCGTGGATG CCGACGTGCT CGGTGTGGGC TACGGCAAAG TCGAATTGAT CCGAGTGGGA
GACCCCGATG CGTGA
 
Protein sequence
MLHHAGSASA RAQRGAIGLL AMGVLGLVIL CLVLALDVGR LYYEKARLQK LADTAAMEAA 
AALARTQDMS TLREMAAANL ARSEGDGAAL TLQRGTIAVD DGINVFVAEE APTSDAVRVV
LRQSVPTSLI VNVERLFSDR DIEDTRTLST ASVARRTPVA ALAMGTQLLS VDGDTALLQP
VLAALGADLD LGLVGYEGLA RTQVTLLELA RELSGVGVDL SAASIDDVLN TTLTVGELAD
ASLNILRGAG NDDALVGLQP ANGAIGLGDV IAALENFTGG LTGKALDVPV RLGDLLAVDL
ESPQRENALF AGIGLDNLLS TALMAANRDS GIHLDDLDLN VGQLASLELD LDIIEPPQIA
VGPVGCETPD VGACSEWRSE AKTAQLDLDV SAAVDVIGLV TLDLDLALES ASASGGIESV
VPLGNQRYDV GVQARSALLT STAEVELSLL KFADVLSLSL DNNESSQTPT AAGTIYRGTL
NDWPERTTLS FGEGIGSVSG LVGPLLTESN IELSLLGSGD EPCSGLLGCL GQGIEDLLNE
ALDSVSDLLA ALTAGLDEVL DNVLAPLVDP LLDALGLRLN GVDADVLGVG YGKVELIRVG
DPDA