| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1662 |
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| Symbol | |
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| ID | 4029124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1890949 |
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| End bp | 1891977 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637966851 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_573714 |
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| Protein GI | 92113786 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.061862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTATC CCCTGTTTTC GTCCGGATCG GTGCGCCGAC CGACATTGCG TCCGGGCCGC
CTGGTGGCCG GGTTCGTCTG CCTGGCGGCA CTGGCGGGCT GCGCCGGCCC CGATACGCCG
AATACCGCCT GGACGCAAAC CGATGGCCGC GCCAACGGCA TCGCCACCGC CAACGAAGAG
GACTCGACGA CCCGGCGCGG CGCCTGCGGC GAACCCATGA GCGCCACCAC CGGCATGCAG
ATCACGCTGA TCCGCCAGAT GCTCGACGAC GACAAGCCGC GCGCGGCGCT GGCGCACCTG
GACAGCCTCT CGCTGGAGGC CACCGGCGCC GATCTCGCCG AGCCGCGACT GCTGCGCGGC
GAAGCGCTGC GCCGCACGGG CAAGCGCGAC GCCGCCGACC GTATCTACGA CAGCCTCACC
GCCACCTGCC TCGCCGCCGA TGCCTGGCGG GGCATCGCCC GCAACCAGGC CGCGCGGGGC
GACATGGCCA CCGCGCTGGC TTCCATGCGC AAGGCACGCG AGTCGCGTCC CATCGACGCC
GCCATTCGCA ACGACCTGGG CTACCTGCAC TTGCTGGAGG GCCAGCCGCG TCAGGCCGAG
GAAGAATTCC TCACCGCGCT GGAGCTCTCG CCGAACTACG CTCGCGCCGC CCGCAACCTG
ATCATGGCGC TGTATGCCCA GGGCAACGCA CGCCAGGCCA CCCGCATCGC CGAGCGCTAC
AGCATCGGCC AGGACGACCT CGAGCTGCTG CGGCAGACGC GTCTGGCCTC GAATGCCACG
GCGTCACCCG CGACCGCGAG GTCGGGTCCG ACCGCGGCCT CGGCATCGGC GACGTCGGTG
TCGGCGACAA CGTCCGTCCC GGCTTCGGTC ACCGACGCGA TCACCGCCAG ACGCAGCGGC
ACCTCGGCAC GCGCGTCCGG CGGCACGACG GCGACACGCA ACGAGGCCGA GACGAGCGGC
GCCATCACCC ACACGCCCAT CGCCATGCCC GACAACACTG CCTTCGAGCT GGAAATCACC
CGCAAATGA
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| Protein sequence | MPYPLFSSGS VRRPTLRPGR LVAGFVCLAA LAGCAGPDTP NTAWTQTDGR ANGIATANEE
DSTTRRGACG EPMSATTGMQ ITLIRQMLDD DKPRAALAHL DSLSLEATGA DLAEPRLLRG
EALRRTGKRD AADRIYDSLT ATCLAADAWR GIARNQAARG DMATALASMR KARESRPIDA
AIRNDLGYLH LLEGQPRQAE EEFLTALELS PNYARAARNL IMALYAQGNA RQATRIAERY
SIGQDDLELL RQTRLASNAT ASPATARSGP TAASASATSV SATTSVPASV TDAITARRSG
TSARASGGTT ATRNEAETSG AITHTPIAMP DNTAFELEIT RK
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