Gene Csal_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1643 
Symbol 
ID4025911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1870273 
End bp1871184 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID637966832 
Productnegative regulator of AmpC, AmpD 
Protein accessionYP_573695 
Protein GI92113767 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0749456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGCGG CAAGACAGGC GACGCGGCGA GACCGGCCAC GCCGCCCGAA CCTGGGCCTG 
ACGCGCAAGG GCTGGCTGTG GGCGATGCCC TGTCTGCTGG CGCTGACGGC CTGCGCCGCG
CCCACGCTGG AAACCCGCGA TGGCTATCAG GTCGATCGCC GCTACACCGC GCCCGGACAG
AGCAGCCGGG TGCGTCATCT GGTGCTGCAT TACACGGACA GCGACGCCCG GCGCTCGCTG
TCGACCTTGA CCGGCCCCCA CGTCAGTGCG CATTACGTGC TCACCCGGGA GGCGCCGAAG
ATCTATCAAC TGGTCGACGA GTCGCGGCGC GCCTGGCATG CCGGGGCCAG TGCCTGGCAC
TCCCGCACCA ATCTCAACGA CACCTCCATC GGCATCGAGG TCGTCAATCG CGGCCCCTAT
CAGACACCGG CGGGACGCGC CTGGACGCCC TACCCTTCAG CGCAGATCGA CACCCTCATC
GCGCTGGCGC GGGATATCGT CGCGCGCCAC GCCATCGACC CCGTGGACGT GGTCGGCCAC
GCCGACATCG CACCGCGGCG CAAGATCGAC CCCGGCCCGC GCTTCCCCTG GTATCGCCTG
TATCGAGCGG GTATCGGCGC CTGGCCGGAG ACAGCGCGGG TCATGGCCTA CCAGCGGCGC
TTCATGGCCT CGCCGCCCTC GCTCACCCAA TGGCAGCGTG CGCTGGCGGC GTATGGCTAT
CCGGTGGCGG TCACCGGCCG CTTCGACGCG CTCACCCATG ACACCTTGCG CGCGTTTCAG
ATGCACTTTC GCCCCACGCG CCATGACGGC TTTCCGGATG CGCACAGCGC GGCCATTCTC
TGGGCATTGC TGGAGAAATA TCGGCCCGAG GCTTTGAGTG ATCTCCGCTC TCCACCCAAC
ATCAATGGAT AG
 
Protein sequence
MRAARQATRR DRPRRPNLGL TRKGWLWAMP CLLALTACAA PTLETRDGYQ VDRRYTAPGQ 
SSRVRHLVLH YTDSDARRSL STLTGPHVSA HYVLTREAPK IYQLVDESRR AWHAGASAWH
SRTNLNDTSI GIEVVNRGPY QTPAGRAWTP YPSAQIDTLI ALARDIVARH AIDPVDVVGH
ADIAPRRKID PGPRFPWYRL YRAGIGAWPE TARVMAYQRR FMASPPSLTQ WQRALAAYGY
PVAVTGRFDA LTHDTLRAFQ MHFRPTRHDG FPDAHSAAIL WALLEKYRPE ALSDLRSPPN
ING