Gene Csal_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1617 
Symbol 
ID4028221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1838380 
End bp1838913 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content68% 
IMG OID637966806 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_573669 
Protein GI92113741 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.223503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAC TCGCTGAGCC CATCGTCTGG CTGGTAGGGG CCGGCGGCCC CGTGCTGGTG 
GTGATCGCCC TGGTCGCCAT GGCCCTGTTC GCCATGGGGC TGGAACGCGG CCTCTACTGG
CAGTTCGTGC ATCGGCGTCG GCGTCGTGCG CTGGTCTCGC GCTGGGTCGC GCGACATGAC
CATCTGAGCT GGAGCGCGCT GACGCTGCGC GAAGTATGGA CCCAGGAACT CATCGGCCAG
CTGCGGCGCC CCTTGCCATG GCTCAAGTTG CTGGTCGGGC TGTGCCCGTT GCTGGGACTG
CTGGGCACGG TTACCGGGAT GATCCAGGTC TTCGACAGCC TGTCGCTGAC CGAGGCCAAT
CAGGCGCGCG CCATGGCCGA TGGCGTGGCG CGCGCCACGC TGCCGACCCT GACCGGGATG
GCGGTTGCCG TGGTGGGGCT GTTGTTCACC ACACGACTCG AACACGTGAT TCGGCGCGAG
GACCAGCGGT TGCATGACCG CATGGCGCGT GCCGTGGAGG ATGCCAATGC GTAG
 
Protein sequence
MPTLAEPIVW LVGAGGPVLV VIALVAMALF AMGLERGLYW QFVHRRRRRA LVSRWVARHD 
HLSWSALTLR EVWTQELIGQ LRRPLPWLKL LVGLCPLLGL LGTVTGMIQV FDSLSLTEAN
QARAMADGVA RATLPTLTGM AVAVVGLLFT TRLEHVIRRE DQRLHDRMAR AVEDANA