Gene Csal_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1616 
Symbol 
ID4028220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1836987 
End bp1838396 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content70% 
IMG OID637966805 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_573668 
Protein GI92113740 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAT GGAAGTCTCT GCTGTTATCC CCGGTGCTGG TCGCGGCGAT GGCGTTGCCG 
GGTGTCGCGT CCCTGGCCTC GGCGCAGGAT GATGGCGCGA CGCCCTCGCT GGGGCAGTTG
CTGGAAAGCT TGCGTACGGA CAGCGACGCC GCCGAGGCAC GTGACCGGCA GCGCCTCGCC
GCCTTGATGG AGGATCGGGA AGCGCTGCGG GACGCCGTGA ACGAGGCCGA GGCCGAACGC
GAGGCGGCCC GTGAGCGGCG CGACGCGCTG GAAGCCACCC AGGCCGAACA ACGCGAGGCG
CTCGAGGCGG TGAACGAGCG TCGCCGCAAC GAGGCGGGCG ACCTCGACGG CGTGTTCGGA
GTGGCGCAGA GCGCCATCGG AGAACTGCGC GATGACCTGG GCGACGGCTG GTTGACGGTG
GGCACCCGGA CCCGGTTGCC GGCGCGCCTG GACGATGACG CCATCATCGA CACCCAGACC
CTGGAATCGC TGGGCCGGAC CTTTGCCGCG CTGACCGCCG AAACGGGACG CGGCGTACGC
TTCGAGGCGC CCATCGCCGA TGCCGAGGGC AACGTCGAGC GGCGCGAGGC GATTCGTCTC
GGCGACTTTC TGGCCTTCAG CGACGGCAAG CTGTTGACCC GCGACGTCGG CGACGACTCG
CGGGAACCGA CACTGCGCGT GGTGTCGCAC ACCCCGGAAG CGGCCTCGCA GGCCTTGCGC
GCCTTCCAGC AGGGCGACGG CGATCGCGTG GTGTTCGATC CGACGCGGGG CAATGTGCTC
GAGGCGCTCT CGCAGCAGCC CACGCTCTGG GAGCGTTTCC AGCAGGGCGG TGCGGTCGGC
TACGTGATCG TGGTGCTGGG CATCGCCGGT CTGCTCGTCG CCTTGTCGCA ATACGTCTAC
CTGCTGCTGG TCAGCGTACG TCTGCGGCGT CAGCTGCGCT CGCCCGATGC GCTGCGCGAC
GACAATCCCC TGGGCCGCGT GCTCGGGCGC TTCGCGGCAC TGGGGCGCGA GCATGCCCCG
GAGGCCCTGG AAGCGCGTCT CGATGAAGCG CTGCTGGCCG AGAAGCCGCG TCTCGAGCGC
GGCCAGCCTC TGGTCAAGCT GATGGCGGCC GTGGCGCCGC TGCTGGGGCT TCTGGGGACC
GTGACCGGGA TGATCGGGAC CTTCCAGTCG ATCACCGTCT TCGGGACCGG CGATCCGCAG
CTCATGGCGG GCGGGATCAG CCAGGCCCTG GTCACCACCG TGCTGGGGCT GATCGCCGCC
GTGCCGCTGC TGTTCGCGCA TACCGCCTTG AGCAGCCGCA GCCGCGAGTT GCTCGGCACC
CTCGAAGGGC GCGCCAGCGC CGTGCTTGCC GAGCATCTCG AAACGCCCGA CGGCCACACG
GGAACGCAGG CCCATGCCCA CACTCGCTGA
 
Protein sequence
MSAWKSLLLS PVLVAAMALP GVASLASAQD DGATPSLGQL LESLRTDSDA AEARDRQRLA 
ALMEDREALR DAVNEAEAER EAARERRDAL EATQAEQREA LEAVNERRRN EAGDLDGVFG
VAQSAIGELR DDLGDGWLTV GTRTRLPARL DDDAIIDTQT LESLGRTFAA LTAETGRGVR
FEAPIADAEG NVERREAIRL GDFLAFSDGK LLTRDVGDDS REPTLRVVSH TPEAASQALR
AFQQGDGDRV VFDPTRGNVL EALSQQPTLW ERFQQGGAVG YVIVVLGIAG LLVALSQYVY
LLLVSVRLRR QLRSPDALRD DNPLGRVLGR FAALGREHAP EALEARLDEA LLAEKPRLER
GQPLVKLMAA VAPLLGLLGT VTGMIGTFQS ITVFGTGDPQ LMAGGISQAL VTTVLGLIAA
VPLLFAHTAL SSRSRELLGT LEGRASAVLA EHLETPDGHT GTQAHAHTR