Gene Csal_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1604 
Symbol 
ID4027566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1824711 
End bp1825526 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID637966793 
Productaminodeoxychorismate lyase apoprotein 
Protein accessionYP_573656 
Protein GI92113728 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0300662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGACG AGGCGGTACC GTTCGATGAT CGGGGCCTCG CTTACGGGGA CGGTCTCTTC 
GAGACCGTCC TCGTGCGTGA CGGGCAGCCT GTCCTGTGGC AAGCGCACAT GGCGCGGCTG
GCACGGGGAG CCGACCGCCT GGGGCTGCCC ATGCCGGCGG CCGAGACGTT GAACGCGCTG
CCCGGGCGGG CGGAAGGTGG CCTGCAGGTG CTCAAGCTGC TCGTGACGCG CGGCAGTGGC
GGGCGCGGGT ACGCCGTGCC CGATACGCCC AGGCCGCGTC TGCGCTGGCG TTTCTCCCCC
TTCGCGCCCA TGCCCCGGCG ATGGCGCGAG GGCGTGCACG TGCGCCTGTG CCACCTGCGC
CTCGGTCATC AGCCGCTGCT GGCCGGCATC AAGCATCTCA ATCGTCTCGA GAACGTACTG
GCGCGTCGCG AATGGCAGGC CCCCGAGATT GCCGAGGGCC TGCTCCGCGA CCAGCAAGAT
CGCCTCGTCG AAGCGACCAG CATGAATCTG GTATGGCGAC GTCACGGGCG GCTGGAAACG
CCGTGCCTGA CGGCATGCGG CGTGGAAGGA ACCCTGCTGT CGACCCTGCG CGAGCATTTG
CCGATCCATG CCTGCGACGC GGGCATCGAT GCCCTGATCG AGGCCGAGGC GGCATGGGTG
CTCAATTCGG TGCAAGGCGC CTGGCCACTG GCACGCCTGG ACGATGCGCA AGGTGGCTGT
CTGAAGCGTT GGTCGATGGG TACCGAGCAC AGGCAATTAC AACGCCACGC CCAGGCGCTG
CTGGGATATC CCGCGAGTGC CCTGGGCGAG GCTTGA
 
Protein sequence
MGDEAVPFDD RGLAYGDGLF ETVLVRDGQP VLWQAHMARL ARGADRLGLP MPAAETLNAL 
PGRAEGGLQV LKLLVTRGSG GRGYAVPDTP RPRLRWRFSP FAPMPRRWRE GVHVRLCHLR
LGHQPLLAGI KHLNRLENVL ARREWQAPEI AEGLLRDQQD RLVEATSMNL VWRRHGRLET
PCLTACGVEG TLLSTLREHL PIHACDAGID ALIEAEAAWV LNSVQGAWPL ARLDDAQGGC
LKRWSMGTEH RQLQRHAQAL LGYPASALGE A