Gene Csal_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1589 
Symbol 
ID4027608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1809190 
End bp1809963 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID637966778 
Product3-deoxy-D-manno-octulosonate cytidylyltransferase 
Protein accessionYP_573641 
Protein GI92113713 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.348786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG TCGTGGTCGT GATACCGGCA CGCTATGGCG CCTCGCGCCT GCCGGGCAAG 
CCCTTGCTGG ACCTCCACGG CGAACCGATG ATCGCCCGCG TCTGGCAGCG CGCGTGTAAG
AGTGACGCGA CGCGGGTGGT GATCGCCACC GATGACGAAC GCATCGAGGC GGCCATGCAG
CCGTACGGCG CGGACGTCAT GCTGACCGCG CCCGATCATC CCTCGGGCAC CGACCGCCTG
GCGGAGGTCG CGGCCCGGCT CGAGCTAGAT GCCGACACCA TCGTGGTCAA CGTGCAGGGG
GACGAGCCCC TGTTGCCGCC GGCGTTGATC GACCAGGTGG TACGCCGGCT GGCCGACGAC
ACCACGGCCT CCATTGCCAC CCTGGCCGAG CCCATCGGCG ACGTGGAAAC CTTGTTCAAT
CCCAACGTGG TCAAGGTCGT GCGCGACCTG CACGGGCGCG CCCTGTATTT CTCGCGGGCG
CCGGTGCCCT GGGATCGGGA GCATTTCGCC ACGCGTCCCG ATTGCCTGGC GACCGATGCC
TGGCTGCGTC ATATCGGCCT TTACGCCTAT CGTGCCGGTT TTCTGGCGGC GTATGTCGAC
TGGCTGCCGT CGCCGCTCGA GCAGCTGGAA CAGCTCGAAC AGTTGCGTGC CATGCACCAT
GGGCACCGAA TCCAGGTGGC GCTGGCCGCC GAGGCGCATC CCGCGGGCGT CGACACCGAA
GCGGATCTCG CGCGGGTTCG TCGCTTGATC GCCGAGGGGG AAGGGGCGGC ATGA
 
Protein sequence
MSDVVVVIPA RYGASRLPGK PLLDLHGEPM IARVWQRACK SDATRVVIAT DDERIEAAMQ 
PYGADVMLTA PDHPSGTDRL AEVAARLELD ADTIVVNVQG DEPLLPPALI DQVVRRLADD
TTASIATLAE PIGDVETLFN PNVVKVVRDL HGRALYFSRA PVPWDREHFA TRPDCLATDA
WLRHIGLYAY RAGFLAAYVD WLPSPLEQLE QLEQLRAMHH GHRIQVALAA EAHPAGVDTE
ADLARVRRLI AEGEGAA