Gene Csal_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1571 
Symbol 
ID4027590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1791343 
End bp1792113 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID637966760 
ProductNa(+)-translocating NADH-quinone reductase subunit C 
Protein accessionYP_573623 
Protein GI92113695 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.470446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA ACAACTCCAT CAAGAAGACG CTGACGGTCG CGCTCGCTCT GTGTATCGTG 
TGTTCGGTGG TGGTCTCGAC CGCCGCCGTG GTGCTGCGAC CCAAGCAGCA GCAGAACCAG
GAGCTCGACC GCAAGAGCAA TATCCTGCAG GTGGCGGATC TCTACGAGCC GGGCATGGAT
ATCGAAGAGG CGTTTTCCGA GTACATCACG CCGCGCGTGA TCGAGCTGGA AAGCGGCGAC
TACACGGATC GATTCGACCC TGAGAGCTTC GATCAGTTCG AGGCCGCGCA GGACCCGGCG
ACCTCCCGCA CGCTCTCCGG TGAGGAAGAT CGCGCGGGGA TCGGGCGCGA GGAGATGTAC
TCCACCGTGT ACCTGGTCGG CGATCCCGAG GACCCCGAAC AGATCATCCT GCCCATCCGC
GGGCAAGGCC TGTGGGGGTT GATGCGTGGC TTCTTCGCCC TCGAGGGCGA CGGCAACACC
ATCATCGGGC TGTCCTACTA TTCTCACTCC GAGACGCCGG GGCTGGGCGG CGAGGTCGAC
AATCCTCGCT GGAAGTCCAA GTGGGAAGGC AAGGAGGTCT ACGCCGACGG CGATATGGAC
CCCGAGATCT CCCTGGTCAA GGGCGGTGCC GAGAGTGAGT ATGAAGTCGA TGCCTTGTCG
GGCGCGACGC TGACCAGTCG TGGCGTCACC AACATGCTGC ATTTCTGGCT GAGCGAGAGT
GGCTTCGGGC CTTATCTCGC CCGCTTCCAC GGCAACTCCG AAGGAGCGTG A
 
Protein sequence
MASNNSIKKT LTVALALCIV CSVVVSTAAV VLRPKQQQNQ ELDRKSNILQ VADLYEPGMD 
IEEAFSEYIT PRVIELESGD YTDRFDPESF DQFEAAQDPA TSRTLSGEED RAGIGREEMY
STVYLVGDPE DPEQIILPIR GQGLWGLMRG FFALEGDGNT IIGLSYYSHS ETPGLGGEVD
NPRWKSKWEG KEVYADGDMD PEISLVKGGA ESEYEVDALS GATLTSRGVT NMLHFWLSES
GFGPYLARFH GNSEGA