| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1554 |
|---|
| Symbol | |
|---|
| ID | 4028119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1766505 |
|---|
| End bp | 1767479 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637966743 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_573606 |
|---|
| Protein GI | 92113678 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAC CCAATCTGCT CAATCGTCTG ACCTTTCGCC AGCTGCAGGT CTTCCAGGCC
GTGCATCGCC AGCAGTCCTA CTCGCGGGCG GCCGAACAGC TCGGGCTGAC CCAGCCGGCG
GTCAGCGCCC AGATCCGCCA GCTCGAACAG GCCCTCGAGC AGCCGCTGTT CAAGTATGCG
GGCAAGACGC TGCATGTCCT GCCCGCCGCG GATGCGCTGG CCGCCTCGGT ACAGTCGATC
TTCGGCCAGG TCTCGAGCCT GCAGATGGAG CTCTCCGAAC TGGCGGGCAC CATCCGCGGC
GAACTCAATC TCGCCGCGGT GAGCACCGCA CAGTACGTGG TGCCCCACAT CCTGGCACGC
TTTCGCGCCC GCTACCCGGA GGTGCAGGTG CGCCTGCGCG TCTGCAATCG CGGCCAGGCC
CTGGAGCGTC TCGCCGAGCG CCGCGACGAC CTGGTGATCA TGGGCATGGT TCCCGAGGAT
GCCAATCTTG CCTTCATGCC GATCCTCGAC AACGAGATGA TTCCCGTGGT GTGGCCCGGC
CACCCGCTCC TGACGGCCGA CGCGCCCACG CTCGAGGACT TCACGCGCTA CTACGTGCTG
ATGCGCGAGC CCGGTTCGGG AACGCGTACC GCCTTCGAGG ACTTCGTCGC CCGCGAGCGC
GTCTCGCTGC GCCACACGCT GGAGCTCGGC ACCAATGAAG CCATCAAGCA GGGTGTCATG
GCGCATCTTG GCGTTGCCGT GCTGCCGCGC CTGGCGGTAC AACTCGAACT CGCCTCGGGA
CTGCTGGCCT CACCGACGCT GCCGGGCTTT CCGTTGCGCC GTTCGTGGTG CACCGTGCAT
CCCAAGGACC GCTATCCCAC GCCCGTGACC GAACTCTTCC TGCGCTTCGT CAGGGAGCTG
CTGCCGGAGC TGAACGCCCA TTTCAAGGCA CCGCTGGTCC CCGCGCCCGG CCCCAGCTTC
GCCTGTACGC CCTGA
|
|---|
| Protein sequence | MSRPNLLNRL TFRQLQVFQA VHRQQSYSRA AEQLGLTQPA VSAQIRQLEQ ALEQPLFKYA
GKTLHVLPAA DALAASVQSI FGQVSSLQME LSELAGTIRG ELNLAAVSTA QYVVPHILAR
FRARYPEVQV RLRVCNRGQA LERLAERRDD LVIMGMVPED ANLAFMPILD NEMIPVVWPG
HPLLTADAPT LEDFTRYYVL MREPGSGTRT AFEDFVARER VSLRHTLELG TNEAIKQGVM
AHLGVAVLPR LAVQLELASG LLASPTLPGF PLRRSWCTVH PKDRYPTPVT ELFLRFVREL
LPELNAHFKA PLVPAPGPSF ACTP
|
|---|
| |