Gene Csal_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1552 
Symbol 
ID4028117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1764150 
End bp1765256 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID637966741 
Productlipoyl synthase 
Protein accessionYP_573604 
Protein GI92113676 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTGGT CGCGCCGCCT CGGCGCCGTC GGCCGGCTTG CAGAGAGGCT CACGCTAATG 
AGTGATACCC CTTCCCAGCG CATCACCAGC GGCAAGAAAT ATCGCAACGA TCAAGGCATC
GCCGCCATCA AGGACGGCAT GAAGTCACGC GAGCCCTCCG AAGGCGGCGT GGGCGGTCGC
AAGCCTCAGT GGCTGCGCGT CCAGATGCCC GGCGGCGAGC GTTTCGAGGC CGTCAAGCGC
AACGTCAAGG AACATCGGCT CAGCACCGTC TGCGCCGAAT CCCATTGCCC CAACATGGGA
GAATGCTGGA GCAACGGTAC CGCCACCATC ATGCTGATGG GATCGGTCTG CACCCGTGCC
TGCCGTTTCT GTGCCGTCGA CACCGGCAAC CCGCGCGGCT GGCTGGATCA CGAAGAGCCG
GCGAACACCG CGGAATCGGT GGAACTGATG GGCTTGCGCT ATATCGTGCT GACCTCGGTG
GACCGCGACG ACCTGCCCGA CGGCGGTGCC GGCCACTACG CCGCCTGCAT CCGCGCGATC
AAGGCACGCA CCCCCCAGGT CGCGGTGGAA GCCCTGACGC CGGACTTCGA TGGCGTGCCC
AGTGCCATCG AGGAAGTCGT CGACTCCGGC CTAGAGGTAT TCGCCCAGAA CGTCGAGACC
GTGGAACGCC TGACCGGCCG GGTTCGCGAC CCGCGGGCCG GCTACCGCAA GACGCTCGAT
GTCCTGGCGC ATGCCAAGCG CCATCGCCCC GAGGTGATCA CCAAGACCAG CCTGATGCTG
GGGCTCGGCG AGACCGAGGA GGAGATCCTG CAGACCTTCG ACGACCTGCG CGAGATCGGC
GTCGATATCG TCACCCTGGG GCAGTATCTG CAGCCGACAC GCAATCACCT GCCGGTGGAG
CGCTGGGTCA CCCCCGAGGA ATTCGAGCAC TATCGCCAGC AAGGCCTGGC CAAGGGCTTC
ATGGAAGTGC CCTCCGGCCC GCTGGTGCGC TCCAGCTACC GCGCGGATCG CGTGTTCGAG
AAGAACAACC TGGGCCTGGC GGAACCCGCC ACGGTGCCCG GGCAGGCCTC GGACCCCGAC
CGCATCGCCG CCGTCAACAT CGGCTGA
 
Protein sequence
MPWSRRLGAV GRLAERLTLM SDTPSQRITS GKKYRNDQGI AAIKDGMKSR EPSEGGVGGR 
KPQWLRVQMP GGERFEAVKR NVKEHRLSTV CAESHCPNMG ECWSNGTATI MLMGSVCTRA
CRFCAVDTGN PRGWLDHEEP ANTAESVELM GLRYIVLTSV DRDDLPDGGA GHYAACIRAI
KARTPQVAVE ALTPDFDGVP SAIEEVVDSG LEVFAQNVET VERLTGRVRD PRAGYRKTLD
VLAHAKRHRP EVITKTSLML GLGETEEEIL QTFDDLREIG VDIVTLGQYL QPTRNHLPVE
RWVTPEEFEH YRQQGLAKGF MEVPSGPLVR SSYRADRVFE KNNLGLAEPA TVPGQASDPD
RIAAVNIG