Gene Csal_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1535 
Symbol 
ID4027633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1747838 
End bp1749208 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content69% 
IMG OID637966724 
ProductUDP-N-acetylmuramate 
Protein accessionYP_573587 
Protein GI92113659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTCC ATATTCTAGG GGTTTGCGGT ACGTTCATGG GGAGTCTGGC GCGGTTGGCC 
AAGGCGCTCG GACATCAGGT CAGCGGTTCG GATGCCAACG TCTATCCGCC GATGAGCACT
CAGCTCGAAG AGGCGGGCAT CGCCCTTTGC GAGGGCTATG CCGCCGACAA CCTGATGCCG
CGTCCCGATC TCGTGATCAT CGGCAATGCA TTGTCGCGCG GCAACCCCGA GGTGGAGGCC
GTGCTCAATG CCAAATTGCC CTACGTCTCG GGCCCGCAGT GGCTGGCCGA GCAGGTGCTG
CCGGGCCGGC GCGTGGTGGC GGTGGCCGGC ACTCACGGCA AGACCACGAC CGCCAGTCTG
CTGACGTGGA TTCTGGAGGC GGCCGGCCAG GCGCCGGGGT TCTTGATCGG CGGGGTGCCG
CGCAATCTGG GCGTGTCCTC GCGACTGGGA GAGCCCGGGG CGCCGTTCGT GGTCGAGGCC
GATGAGTACG ACACGGCCTT CTTCGACAAG CGTTCCAAGT TCGTCCACTA CCGCCCGGAT
ATCGCGGTGC TGGGCAACCT CGAGTTCGAT CACGCGGACA TCTTTCCCGA CCTGGCCGCC
ATCGAGCGTC AGTTCCACCA TCTGGTACGT ACCGTCCCCG GGCAAGGGCA ACTGGTGGTG
GCGGCGGGCG AGCCCGCCCT CGAGCGCGTG CTGGCGCAAG GCTGCTGGAG CCCCGTCGTG
CGTTTCGGTG CCAGCGACGA CGCCTCATGG CAGTGGCGGC TGGAAAGCGC CGATGGCCGT
CGCTTCGCGG TGCGTCATGG CGAGCGCGTC GCGCACGTCG ACTGGGCGCT GAGCGGGCGT
CACAACGTCG CCAACGCGGT GGCGGCCCTG GCTGCGGCGT CGGCCTGCGG TGTCGCCCTC
GAGGCAGGGG CGGCGGCGCT GGCACGCTTC GAATCGCCGC GCCGACGCCA GGAGGTGCGA
GGCGAGGTCG GCGGCATTCA GGTCATCGAC GACTTCGCCC ATCATCCCAC GGCCATCGCC
GCCACGCTCG AGGGGCTGGC AGCGGCGACC GACGCGGGGC GGCTGCTGGC GGTGATCGAA
CCGCGTTCCA ATACGATGCG TCTGGGCAGC ATGCGCGAGC GCTTGCCGGA CAGCGTGGCG
GCGGCGGACC GCGTCTGGTG GTATCGGCCA CCGGAGGTCG AATGGTCGCT GGAGGCGCTT
GCGGCGGCCT GTCCGGTGCC GGCGACGGTG AGCGACGAGA TGCCGGCCCT GGTCGCGGCC
ATCGTGGCCG AGGCGCGTCC GGGAGACCGG ATCGTGGTGA TGTCGAACGG GGCGTTCGGC
GGTATCCACG AAAAGTTGCT GGCGGCACTG GAGGCCCGGC ATGGCGGATG A
 
Protein sequence
MHVHILGVCG TFMGSLARLA KALGHQVSGS DANVYPPMST QLEEAGIALC EGYAADNLMP 
RPDLVIIGNA LSRGNPEVEA VLNAKLPYVS GPQWLAEQVL PGRRVVAVAG THGKTTTASL
LTWILEAAGQ APGFLIGGVP RNLGVSSRLG EPGAPFVVEA DEYDTAFFDK RSKFVHYRPD
IAVLGNLEFD HADIFPDLAA IERQFHHLVR TVPGQGQLVV AAGEPALERV LAQGCWSPVV
RFGASDDASW QWRLESADGR RFAVRHGERV AHVDWALSGR HNVANAVAAL AAASACGVAL
EAGAAALARF ESPRRRQEVR GEVGGIQVID DFAHHPTAIA ATLEGLAAAT DAGRLLAVIE
PRSNTMRLGS MRERLPDSVA AADRVWWYRP PEVEWSLEAL AAACPVPATV SDEMPALVAA
IVAEARPGDR IVVMSNGAFG GIHEKLLAAL EARHGG