| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1527 |
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| Symbol | |
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| ID | 4029229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1738786 |
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| End bp | 1740645 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637966716 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_573579 |
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| Protein GI | 92113651 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.80343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGAG CGGCCGGGTT CCCGGCCGAA GCGCTTTGCC CCGCCTGGCC GAGCCGGTAT
GCTGATGCTT TCCGATGCAA ACTCGAGGAT GGCATGCGCA CACGCTTGAC TCTGGCCACC
ACCCTGGCGT TGCTGCTGAC GGGCTGCCAG CACGCGGCGA CCACGCCCGG CGCCATCCCG
CTCGAAGACC CCATGGAAAA CGCCCCACCG GTGGCTCGCG GCTTCGACGC CGAAGGGCTC
TCGACACTGT TGCTGGCCGA AATAGCCGGC CAGCGTGGCG ACTACCGCCG AGCGGCTCGG
GGTTACCTGG AGGTCAATGA ACGCTACGGC TCCGTCGCCC TGGCCGAACG CGCCACGCTC
GCGGCGCGTT ATGCCAATGA CAGCGCCCTG CTGGAGCAGG CTGCGCTGCG CTGGCAACGG
CTCGCCGACG ATGCCACCAC CCCGCACTAC GTGCTGGCCA GCCTGGCGGT GCAACGCGGC
GACTGGGAAA CCGCTCTGGC GCAACGCCTG CGCATCGCCG CTCGGGAGCC CGACGCCGAA
CTCGCCGCCC TGGCAGAACT GGCCATCGAG GACGATGCCG ATCTGGCACC GCTGATGGCA
GACCTGCACG ACTTCATCGA CGAGCATCCC GACCATCTCG ACGCTCAACT GGCCACGGCA
CAACTCGAGG CGGCGCAGGG CGACATCCAG ACAGCCGACG CCCGGCTCGC GCGCCTGTCG
GACAACGCCG ACGCGCCTGC CGACGTATGG CTGACCCGCA GCACGATTGC CCTGCACCGT
GGCGCATTGA GCGACGCACG TCGTTATGCC AGCCAGGGGC TGCGCCAGTT TCCCGACGAC
AGCCGCTTGC GCCTGACGCT GGTTCAGGCA CGCCTGGCCG ACGGCGAGAT CGCCGCCGCC
CACGACGATG TCGAACGCCT GCTGGCACGT CACGACGATA CCGCCTCCTT GCGCCTGGCT
CTCGCCCAGA TGTATCTCGA CGCCGCGCAA CCCGATGGCG CACGGCGCCT TCTGCTGCCA
CTGCTCGACC GCGACGACAC CCCGCCCGCC GCTTACCTGA TGCTGGGCAG CATCGCCGAG
CGCGCCGGCG AGACCGACAA CGCGCTTCTT TATTACCGCC AGGTACCCAG CGGCGATGGC
TTCATCGAAG CGCGCGCTCA GGCCGCCAGG ATGCTGGTCG CCGACGACCG CCCCCAGGAC
GCCAGCGCCT TCCTGCGCAT CGAGCGCCTC CGTCACCCCG ATCAGCGCGT TCCCTTGTTG
CGCCTCGAGC TGGACGTGCT CGATGCCCAG GGTCAGCAGG AACGCGCCGA CCGTCTTCTC
GACGAGGCCA TCGCCAAGAC GCCCGACGCC ACCGAGCTTC GCTTTCAGCG CGCCATGCGC
GCCTATCGCC AGGGCGACCT GCAGGCCATG GAGGCCGATC TGCGGGCAAT CATCGAGCGT
GAACCGGACA ATGCCGAGGC ACTCAATGCG CTCGGCTATA CCCTGAGCAA CGACATGGGG
CGCCACCGCG ACGCCCTGCC GCTCATCGAA AAGGCGCATC GCCTCGAGCC CGACAGCCCC
GCGATCCTCG ACAGCCTCGG CTGGGTCTAC TTTCATCTCG GTCGTGCCGC CGACGCCCTG
CCCTATCTGC GCGAGGCCTA TCGCGGCCAG CCCGATCAGG AAATCGCCGC GCATCTCGCC
GAGGTGCTCG CTGCTACCGG GCAACGCGAT GACGCGCGCG ACCTGATAGA GGAAGCACAG
CGCCGTTTTT CTCCGCATCC GCTCATCGAC GAGCTGTTGC GTCGCCAGCC TGAACTCGCG
CCGGACGACA CGGCACCGGA TGCCGCCGAT TCGCCTCACG ACAAGGAAGC CGACTCATGA
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| Protein sequence | MSRAAGFPAE ALCPAWPSRY ADAFRCKLED GMRTRLTLAT TLALLLTGCQ HAATTPGAIP
LEDPMENAPP VARGFDAEGL STLLLAEIAG QRGDYRRAAR GYLEVNERYG SVALAERATL
AARYANDSAL LEQAALRWQR LADDATTPHY VLASLAVQRG DWETALAQRL RIAAREPDAE
LAALAELAIE DDADLAPLMA DLHDFIDEHP DHLDAQLATA QLEAAQGDIQ TADARLARLS
DNADAPADVW LTRSTIALHR GALSDARRYA SQGLRQFPDD SRLRLTLVQA RLADGEIAAA
HDDVERLLAR HDDTASLRLA LAQMYLDAAQ PDGARRLLLP LLDRDDTPPA AYLMLGSIAE
RAGETDNALL YYRQVPSGDG FIEARAQAAR MLVADDRPQD ASAFLRIERL RHPDQRVPLL
RLELDVLDAQ GQQERADRLL DEAIAKTPDA TELRFQRAMR AYRQGDLQAM EADLRAIIER
EPDNAEALNA LGYTLSNDMG RHRDALPLIE KAHRLEPDSP AILDSLGWVY FHLGRAADAL
PYLREAYRGQ PDQEIAAHLA EVLAATGQRD DARDLIEEAQ RRFSPHPLID ELLRRQPELA
PDDTAPDAAD SPHDKEADS
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