Gene Csal_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1523 
Symbol 
ID4029224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1735336 
End bp1735983 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID637966711 
Product50S ribosomal protein L25P 
Protein accessionYP_573575 
Protein GI92113647 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.027248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAT TCACTCTATC CGCCGAGGTT CGTCACGACC TGGGGAAAGG TGCGAGCCGC 
CGCCTGCGTC GTGAGAACAA GAAAGTCGCC GCCATCATCT ACGGTGGCAG CAAGACGCCG
CAACCGATCA CCCTCGAAAA GTCCGCCTTC TACAAGGCCA TCGAGGATGA AGCCTTCTTC
TCGTCGGTGA TCAACATCGA CCTCGAAGGC CAGTCGGAAC AGGTCATCAT TCGCGACATC
CAGCGCCACC CGTACAAGGC GCTGGTGACG CATGCCGACT TCATGCGAGT CGATGCCACG
CACGAAATCA CCATGAACGT CCCGCTTCAC ATCAACGGTG AAGAAGCCTG CAAGGGCGTC
AAGGATGAAG ACGGCGTGCT GCACGTGCTG GCCAACGACG TCGAGATCAG CTGCCTGCCC
GGCAAGCTGC CCGAATACCT CGAAGTCGAC GTCACCAACC TGGGTCTAGG CGAGACGCTG
CACCTGTCCG ACCTGCCGCT GCCGGAAGGC GTTTCCCTCG TGGCCTTGAG CCATGGCGAG
GAACACGACT TCGGCGTGGT CAGCGTGACC CGTGCCGACA CCGGCACCGA GGGTGACGAG
GAAGGCGGCG AAGAAGCCAC CGACGAAGAC GGCGAGAAGT CCGAGTAA
 
Protein sequence
MSQFTLSAEV RHDLGKGASR RLRRENKKVA AIIYGGSKTP QPITLEKSAF YKAIEDEAFF 
SSVINIDLEG QSEQVIIRDI QRHPYKALVT HADFMRVDAT HEITMNVPLH INGEEACKGV
KDEDGVLHVL ANDVEISCLP GKLPEYLEVD VTNLGLGETL HLSDLPLPEG VSLVALSHGE
EHDFGVVSVT RADTGTEGDE EGGEEATDED GEKSE