| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1518 |
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| Symbol | ligB |
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| ID | 4029218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1727466 |
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| End bp | 1729355 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637966705 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_573570 |
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| Protein GI | 92113642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000466124 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGAC GACCTGTGTG GATTGACGGT TCAGACATGC GTCCTGCGCC ACTGCGAACC
GCAGCCTGGC TGAGAGCGTG CCTGCTGGTC GGCCTGAGCA CCCTCGCCAT GCCCGGCTGG
GCGAGCGCGC CACCCTGCCC CCAGATGACG CCCGAGGCCA TGCAGAACGA CTACCAGGCC
CTCGACGCTC GGATCGCACG CTGGGATCGC GCCTACTACC GACAGGGACA GCGCCTGGTC
GACGACGGCA CCTACGACAG CGCCAAACGC CGGCTCGCGC ACTGGGCGGA GTGCTTCCCC
TTGCTCGCGA AGCCATCTGT CAACACGCAC GAACCCACGG GGGCGAAGCA TCATCCGGTC
GCACAGACCG GTATCGCCAA ACTGCCCGAC CGCGACGCCG TTGCCGGCTG GGTCGCACGT
CAGGGCGATC ACCCGCTGTG GGTGCAACCC AAGGTCGACG GCGTCGCCGT GACTCTGGTC
TATCGGCATG GCCGGCTTGC AGCTGCCATC AGCCGCGGCG ATGGCGTCTC TGGCCAGGAT
TGGTACACCA AGGCGCTGCA TATCGCGGCG ATTCCCTCGC ACCTGCCGGC AGATGCCCCG
CCGCTGGTCA TACTGCAAGG CGAGCTCTAC GCCAGACGCA CGGCACACCG ACAATCGCGC
GACGGCACCG ACGGTGCACG CGCGCGAATC GCCGGCCTGA TGGCACGCGA CACCTTGACG
GATCGTGAAG GCAGCACGAT CGGCCTGTTC GTCTGGGCGT GGCCCAACGG ACCCGACACC
ATGCCCGAAC GCCTGGAGAC GCTGGCTGGC TGGGGATTCG GCGACGTCGC CGAGATGACG
CATGGGGTCG CCACGGCGGA AGATATCGCC GCCTGGCGCC AACGCTGGTA CCGCCATGCC
CTGCCCTTCG CGACCGATGG CGTCGTCGTC AAGCGCGGAG ACCGGCCGCC GGGAAGCGAC
TGGCAGGCCT CGCCGCCGGA CTGGGCAATG GCTTGGAAGT ACCCTGCGCG CGAGGCGCTC
GCGCGTGTCG ATGCACTCGA ATTCTCGGTC GGTCGCACCG GGCGCATCGC GGTCGTCGCC
GAGCTGGAAC CGGTCCTTCT GGGGGACAAG CGCGTGACCC GCGTCAGCCT CGGGTCCCTG
GCGCACTGGC GACGCACGGA CGTCCGCCCC GGCGATCAAG TACGCTTGCG CCTGGCCGGG
CTCACCATCC CGCAACTGCA GGAGGTCGTG GTCCGTACTC GGCCGCGACC GCAGGTCGAC
GCTCCCGAGG CAGACCAATA CGATCGCCTT TCCTGCCTGC GGTTCACGCC CGCATGTCGC
GATCAATTCC TCGCGCGTCT CGAGTGGCTG GGCAGCGACG AGGGGCTGGA CTTTCCCGGC
ATCGGTCCCG CGACATGGAA TCAGCTGGTG GATGCCGGCC TGGTCAAGGG GCTTCTGGAC
TGGCGAACGC TCGATACCGC AGCCCTTGAA GCCTTGCCCG GCGTAGGCAA GAAGACCGCC
CGGGCCTGGC AGCGGCATTT CGCCCTCGCC GACACGCGCT CTGCGGTGCG CTGGTTACGT
GCCCTGGGCG TTCCCGCCGT GCCTCGACAG GCACTGACCG ATGCCCTCGA GCGATACGGC
ATGGCCGGAC TCGGCACTCT CGCGCCACCG GACTGGCGTG ACTACTCAGG GATCGGCGAA
ACACGTGCCA TGCAGCTGAC GCGTTTTTTT CGAGACACGG ACATTCGGCA CTGGCTGGCG
TCACTGGAAA GCACGAGAGC GCTTCAGAAA CAACACGGGA CAAACACGAG GAACGAGCAG
AAAGGGGACG TACGGAGGGT CGATGTCAAG CAGGACAATG GTACCACTTG GCTCCCCGAG
CAGGACTCGA ACCTGCGACC CAATGATTAA
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| Protein sequence | MSRRPVWIDG SDMRPAPLRT AAWLRACLLV GLSTLAMPGW ASAPPCPQMT PEAMQNDYQA
LDARIARWDR AYYRQGQRLV DDGTYDSAKR RLAHWAECFP LLAKPSVNTH EPTGAKHHPV
AQTGIAKLPD RDAVAGWVAR QGDHPLWVQP KVDGVAVTLV YRHGRLAAAI SRGDGVSGQD
WYTKALHIAA IPSHLPADAP PLVILQGELY ARRTAHRQSR DGTDGARARI AGLMARDTLT
DREGSTIGLF VWAWPNGPDT MPERLETLAG WGFGDVAEMT HGVATAEDIA AWRQRWYRHA
LPFATDGVVV KRGDRPPGSD WQASPPDWAM AWKYPAREAL ARVDALEFSV GRTGRIAVVA
ELEPVLLGDK RVTRVSLGSL AHWRRTDVRP GDQVRLRLAG LTIPQLQEVV VRTRPRPQVD
APEADQYDRL SCLRFTPACR DQFLARLEWL GSDEGLDFPG IGPATWNQLV DAGLVKGLLD
WRTLDTAALE ALPGVGKKTA RAWQRHFALA DTRSAVRWLR ALGVPAVPRQ ALTDALERYG
MAGLGTLAPP DWRDYSGIGE TRAMQLTRFF RDTDIRHWLA SLESTRALQK QHGTNTRNEQ
KGDVRRVDVK QDNGTTWLPE QDSNLRPND
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