Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1513 |
Symbol | |
ID | 4029209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1720280 |
End bp | 1721494 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637966696 |
Product | secretion protein HlyD |
Protein accession | YP_573565 |
Protein GI | 92113637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.461504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACACT CGCCTGCTCG TCACTCCCGC CGTCTCTGGG GCCTTCTGCT GGTCGTCGTG CTGGTCGCGC TCGCCGTGTG GTGGGTGACC GATTGGCGGC GCAGCGACCC CCAGGGCGAG CCACCGGCAG ACGCAGCGCG CAACGGCGGC ACGGCCGTGG CCGCCGTCGC CGCCCAGCGC GGCGACCTCG CGGTCACGGT CGGGGCGCTG GGCACGGTGC GCTCGCTGGC GAGCGTGGCC ATACGCCCGC GCGTGGAAGG CGAACTGCTG GAGGTGGCAT TCGAGGAAGG CGAACACGTC GAGCAGGGCC AGCTGCTGGC CACCATCGAC CCGCGCGACT ACCAGGCACA ACTGGCCGCC GCCCAGGGAC AGCTGGTTCA GGATCAGGCC CAGCTGGCCT CGGCACGCGA CGATCTCGAA CGTTATCAGA CTCTGGTCGA GCGTCAGGCC GTGGCCCGCC AGGAACTCGA GCAGCAGCGC CAGCTGGTAC GCCAGTACGA AGGCGCCGTC GCCAGCGACA AGGCCAATAT CGACAGCGCT CAGGTACAGC TGGATTACAC CCGCATCACC GCCCCCAGCG ACGGTATCAT CGGCATTCGC AACGTCGATC CCGGCAACCT GGTCGCCAGC GGCGACGACG ACCCCATCGC CACGCTCGTC CAGCTCGATC CCATTTCCGT GGTGTTCTCG CTGCCCAGCC AGTACGTTCC CACCCTGCGC GAGCAGCTCG ACGCCGGGGA CGCGCCCACG GTCACGGCGA CCACGGTGGG TGGCGAACGA CTCGAGGGCC GACTGGCCAG TCTCGACAGC CAGGTCGACA CCGCCACCGG CACCGTGCGG CTCCGGGCCC GCTTCGACAA CGACAGGGGC CGTCTCTATC CCAGTGCATT CGTCGATGTG CGCCTGACGG TTCGCACGCT GCATGACCGT GTCATCGTGC CCGAACCGGC GGTACAGACC GGCCAGGACG GCCTGTTCGT CTACGTCGTC AACGACGACG ATACGGTCAG CCGGCGCGAT GTCGAGGTGA GCGCCAGCGA GAATCATCGC AGCGCACTGG TCAGTGGCGT GGCGGCGGGC GAGCGCGTGG TGGTGGACGG CATCGACAAC CTGAGCGACG GTGCCGCGGT CCGCGTGGTC AGCGATGCCC TGCCCGGTGA ATCCCGCGAC ACGGCGACCG GCGACGCCGA CGCGGCGGCT CGGGACGCAT CATGA
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Protein sequence | MSHSPARHSR RLWGLLLVVV LVALAVWWVT DWRRSDPQGE PPADAARNGG TAVAAVAAQR GDLAVTVGAL GTVRSLASVA IRPRVEGELL EVAFEEGEHV EQGQLLATID PRDYQAQLAA AQGQLVQDQA QLASARDDLE RYQTLVERQA VARQELEQQR QLVRQYEGAV ASDKANIDSA QVQLDYTRIT APSDGIIGIR NVDPGNLVAS GDDDPIATLV QLDPISVVFS LPSQYVPTLR EQLDAGDAPT VTATTVGGER LEGRLASLDS QVDTATGTVR LRARFDNDRG RLYPSAFVDV RLTVRTLHDR VIVPEPAVQT GQDGLFVYVV NDDDTVSRRD VEVSASENHR SALVSGVAAG ERVVVDGIDN LSDGAAVRVV SDALPGESRD TATGDADAAA RDAS
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