| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1513 |
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| Symbol | |
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| ID | 4029209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1720280 |
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| End bp | 1721494 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637966696 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_573565 |
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| Protein GI | 92113637 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.461504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACACT CGCCTGCTCG TCACTCCCGC CGTCTCTGGG GCCTTCTGCT GGTCGTCGTG
CTGGTCGCGC TCGCCGTGTG GTGGGTGACC GATTGGCGGC GCAGCGACCC CCAGGGCGAG
CCACCGGCAG ACGCAGCGCG CAACGGCGGC ACGGCCGTGG CCGCCGTCGC CGCCCAGCGC
GGCGACCTCG CGGTCACGGT CGGGGCGCTG GGCACGGTGC GCTCGCTGGC GAGCGTGGCC
ATACGCCCGC GCGTGGAAGG CGAACTGCTG GAGGTGGCAT TCGAGGAAGG CGAACACGTC
GAGCAGGGCC AGCTGCTGGC CACCATCGAC CCGCGCGACT ACCAGGCACA ACTGGCCGCC
GCCCAGGGAC AGCTGGTTCA GGATCAGGCC CAGCTGGCCT CGGCACGCGA CGATCTCGAA
CGTTATCAGA CTCTGGTCGA GCGTCAGGCC GTGGCCCGCC AGGAACTCGA GCAGCAGCGC
CAGCTGGTAC GCCAGTACGA AGGCGCCGTC GCCAGCGACA AGGCCAATAT CGACAGCGCT
CAGGTACAGC TGGATTACAC CCGCATCACC GCCCCCAGCG ACGGTATCAT CGGCATTCGC
AACGTCGATC CCGGCAACCT GGTCGCCAGC GGCGACGACG ACCCCATCGC CACGCTCGTC
CAGCTCGATC CCATTTCCGT GGTGTTCTCG CTGCCCAGCC AGTACGTTCC CACCCTGCGC
GAGCAGCTCG ACGCCGGGGA CGCGCCCACG GTCACGGCGA CCACGGTGGG TGGCGAACGA
CTCGAGGGCC GACTGGCCAG TCTCGACAGC CAGGTCGACA CCGCCACCGG CACCGTGCGG
CTCCGGGCCC GCTTCGACAA CGACAGGGGC CGTCTCTATC CCAGTGCATT CGTCGATGTG
CGCCTGACGG TTCGCACGCT GCATGACCGT GTCATCGTGC CCGAACCGGC GGTACAGACC
GGCCAGGACG GCCTGTTCGT CTACGTCGTC AACGACGACG ATACGGTCAG CCGGCGCGAT
GTCGAGGTGA GCGCCAGCGA GAATCATCGC AGCGCACTGG TCAGTGGCGT GGCGGCGGGC
GAGCGCGTGG TGGTGGACGG CATCGACAAC CTGAGCGACG GTGCCGCGGT CCGCGTGGTC
AGCGATGCCC TGCCCGGTGA ATCCCGCGAC ACGGCGACCG GCGACGCCGA CGCGGCGGCT
CGGGACGCAT CATGA
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| Protein sequence | MSHSPARHSR RLWGLLLVVV LVALAVWWVT DWRRSDPQGE PPADAARNGG TAVAAVAAQR
GDLAVTVGAL GTVRSLASVA IRPRVEGELL EVAFEEGEHV EQGQLLATID PRDYQAQLAA
AQGQLVQDQA QLASARDDLE RYQTLVERQA VARQELEQQR QLVRQYEGAV ASDKANIDSA
QVQLDYTRIT APSDGIIGIR NVDPGNLVAS GDDDPIATLV QLDPISVVFS LPSQYVPTLR
EQLDAGDAPT VTATTVGGER LEGRLASLDS QVDTATGTVR LRARFDNDRG RLYPSAFVDV
RLTVRTLHDR VIVPEPAVQT GQDGLFVYVV NDDDTVSRRD VEVSASENHR SALVSGVAAG
ERVVVDGIDN LSDGAAVRVV SDALPGESRD TATGDADAAA RDAS
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