| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1512 |
|---|
| Symbol | |
|---|
| ID | 4029208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1717155 |
|---|
| End bp | 1720283 |
|---|
| Gene Length | 3129 bp |
|---|
| Protein Length | 1042 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637966695 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_573564 |
|---|
| Protein GI | 92113636 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.901552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAT CGCGTCTGTT CATCCTGCGT CCGGTCGCCA CCTCGCTGGT GATGCTGGCC
ATCCTGATTG CGGGCGCGCT TGCCTATCGC CTGTTGAGCA TCTCGTCGCT TCCCGAGGTC
GACTTCCCGA CCATTCAGGT CACCACGCTC TATCCCGGCG CCGGCCCGGA CGTCATGCTG
TCCCACGTCA CCGCACCGCT GGAAGACGAG CTCGGCGAAA TCGCCGGCCT TGATGCCATG
AGCTCCACCA GCACCGGCGG CGCGTCGTTG ATCACCCTGC GCTTCGGGCT CGACAGCGAC
CTCGGCGTCG CCGAGCAGGA AGTCCAGGCC GCGCTCAATC AGGCCGACAC CCTGCTCCCG
GACGACCTTC CCCGGCCACC GAGCTACAGC AAGGTCAACC CCGCCGACAC GCCAGTGCTG
ACACTCGCCG TGACCTCCGA CAGTCTGCCG CTGACCGAGG TGCATGATCT GGTCGATACC
CGTCTGGCAC AGAAACTCGC CCAGATCGGC GGCGTCGGTG AAGTCCGCCT GGCCGGCGGC
AACCGCCCTG CGGTGCGCAT CGACGTGGAC GCACGCCGAC TCGCCGCGCA TGGCCTCGAC
CTGGCCGGCG TGCGCAATGC CGTGGAAAGC GCCAACGTCA ATCAGGCCAA GGGCACCATC
TACGGGCCGT ATCGCGCCTA CAGCATCGAT GCCAACGACC AGTTGACCTC GGCGGCGGGC
TATCGCGACC TGATCCTCAA GTACGAGAAC GGCGCGCCCC TGCGTCTGAG CGATGTGGCC
AGCATCGACG ATGGGGCGGA AAACGCGCAG CTGGGCGCCT GGGCCAACGG CAAGGGCGCG
ATCCTGATCG ATGTTCTGCG CCAACCGGGT GCCAACGTCG TCGGCGTGAT CGATGACATC
GAACGCGCGC TGCCCACGCT ATCGGCCAGC CTGCCGGGCA GCGTCGACGT GGAGATTCTC
AGCGACCGGA CCACCACGAT CCGCGCCGCC GTGGAGGACG TCCAGTTCGA ACTGATCCTG
GCCGTCGGGC TGGTCATCAT GGTGACCTTC CTCTTCCTGC GCAATCTGCC GGCGACCCTG
ATTCCCAGTC TCGCCGTGCC GCTGTCGCTG GTGGGCACCT TCGGCGCCAT GTACCTGGCG
GGCTTCAGTC TCAACAACCT CACGCTGATG GCACTGACCA TCGCCACCGG GTTCGTCATC
GACGATGCCA TCGTGGTCCT GGAGAACATC ACGCGCTACC TCGAACGCGG CGAATCTCCG
CTGCAAGCCG CCCTCAAGGG CTCGCGCCAG ATCGCGTTCA CCATTCTCTC GTTGACGGTA
TCGCTGCTCG CGGTTCTGAT CCCGCTGCTG TTCATGAGCG GCGTAGTCGG CGTGTTGTTC
CGCGAATTCG CCATGACGCT GGCGATCTCC ATCGTCATTT CGGCATTCGT CTCCCTGACC
CTGACGCCGA TGCTGTGCGC GCGCTGGCTG CGCTCGCATG ACGACGCGGT CGACGCCGAG
CGACCGCCCC TGGATGACGA AGCGCTGGTC CGCAGCCGGC AAGGGCTCTT CGGCCGGCTC
ACCCGGGGCT ATGAACGCGC CCTGGACGCG GTACTGCGCC ACCAGCGTGC CACGCTATGG
GTCGCCCTGG GCACGTTCGC GCTGACGGCG GTGCTCTTCT GGCTGGTGCC CAAGCAACTC
TTTCCGGTCC AGGATACCGG TACGCTGCGC GGGGTCACCA CGGCCACCCA GTCGACGTCA
TACCAGGCCA TGGCGGCCCG TCAGCAGGCG CTGGCCGCGC GTCTGATGGA CGACCCCGCA
GTGGCCAACA TCGCCTCGAG CGTGGGTATC GACGGCACCA ACACCACCCT CAACGGCGGG
CGCCTGCAAA TCGACCTGGT CGATCTCGGG GCACGCGATG CCAGCCTCGA CGCCATCATC
GCGCGGCTTG ACGCCGCCGC CGCGGATGTT CCCGGGATCG ACCTGGCTCT GACGCCGGTA
CAGGACCTGA CGCTGGAGGA CACCGTCAGC CGCTACCCTT ACCAGTTCGC CCTGACGCAA
GGCGACCGCG AACGTCTGGC CAAGGACGTC GCCGCCATGA CCGAGCGTCT CCAGGATTCG
CCGGCCATCG CCCATGTCGC CACCGACCTG CAAAACGCGG GACGCAAGCT CGAGGTCAGT
ATCGACCGGG AACGCGCCAG TCGCCTGGGC GTATCGGTGG CCGACATCGA CGACGCACTC
TACGATGCCT TCGGCCAGCG CCTGATCTCG ACCATCTTCA CGCAATCCAA CCAGTACCGC
GTCGTGCTGG GCGCCACGCA GGCCAACGCC GAGGGGCCCG AGGCCCTGGA GCGGCTCTAC
GTGAGCGGCA GCGATGACGC CATGATTCCC CTGTCGAGTC TGGTCAGCGT CGAGGAAGCC
CCCACCGCCC TGTCGCGCCA GCGGCTCAAC CAGTTCCCCT CGGCGCTGAT GTCATTCGCA
CCGGCCGCGG ACCATTCGCT GTCCGAGGCT TTCGCCGCCG TGGAAGCCGC CCGTGACGAC
GTGCTGGCCG CCGATACCCG GCTCGATTTC CGCGGTACGG CCCTGGCGTT CACCACCTCG
ACGCGCGACA CGCTATGGCT GATCGCCGCG GCCATCGTGA CCATGTACAT CGTGCTCGGC
GTGCTCTATG AAAGCTATAT CCATCCGTTG ACGATTCTTT CCACCCTGCC CTCGGCGGCC
ATCGGCGCGC TGCTCGCCCT CATGCTCAGC CAAAGTGCCC TGGGCATGGT CGCCGTGATC
GGCATCATCC TGCTGATCGG CATCGTCAAG AAAAACGCCA TCATGATGAT CGACTTCGCG
CTCGAGGCGC AGCGCGAGCA AGGCATGTCC GCCGCACGCG CCATTCATAG CGCCGCATTG
CTGCGTTTCC GGCCGATCAT GATGACCACC TTCGCCGCCC TGCTCGGGGC ACTGCCGCTG
ATGCTGGCCA GCGGCTACGG CGCCGAGCTG CGGCGGCCGC TGGGCATGAC CATGGTCGGC
GGACTGTTGC TCAGCCAGTT GCTGACGCTG TTCACCACGC CCGTGATCTA CCTCTTCTTC
GACCGGCTCG CCGAGCGCTG GCACGACCGC CGGCAACGCC GCGAACGCAC GCACGGAGCG
AGCTCTTGA
|
|---|
| Protein sequence | MNPSRLFILR PVATSLVMLA ILIAGALAYR LLSISSLPEV DFPTIQVTTL YPGAGPDVML
SHVTAPLEDE LGEIAGLDAM SSTSTGGASL ITLRFGLDSD LGVAEQEVQA ALNQADTLLP
DDLPRPPSYS KVNPADTPVL TLAVTSDSLP LTEVHDLVDT RLAQKLAQIG GVGEVRLAGG
NRPAVRIDVD ARRLAAHGLD LAGVRNAVES ANVNQAKGTI YGPYRAYSID ANDQLTSAAG
YRDLILKYEN GAPLRLSDVA SIDDGAENAQ LGAWANGKGA ILIDVLRQPG ANVVGVIDDI
ERALPTLSAS LPGSVDVEIL SDRTTTIRAA VEDVQFELIL AVGLVIMVTF LFLRNLPATL
IPSLAVPLSL VGTFGAMYLA GFSLNNLTLM ALTIATGFVI DDAIVVLENI TRYLERGESP
LQAALKGSRQ IAFTILSLTV SLLAVLIPLL FMSGVVGVLF REFAMTLAIS IVISAFVSLT
LTPMLCARWL RSHDDAVDAE RPPLDDEALV RSRQGLFGRL TRGYERALDA VLRHQRATLW
VALGTFALTA VLFWLVPKQL FPVQDTGTLR GVTTATQSTS YQAMAARQQA LAARLMDDPA
VANIASSVGI DGTNTTLNGG RLQIDLVDLG ARDASLDAII ARLDAAAADV PGIDLALTPV
QDLTLEDTVS RYPYQFALTQ GDRERLAKDV AAMTERLQDS PAIAHVATDL QNAGRKLEVS
IDRERASRLG VSVADIDDAL YDAFGQRLIS TIFTQSNQYR VVLGATQANA EGPEALERLY
VSGSDDAMIP LSSLVSVEEA PTALSRQRLN QFPSALMSFA PAADHSLSEA FAAVEAARDD
VLAADTRLDF RGTALAFTTS TRDTLWLIAA AIVTMYIVLG VLYESYIHPL TILSTLPSAA
IGALLALMLS QSALGMVAVI GIILLIGIVK KNAIMMIDFA LEAQREQGMS AARAIHSAAL
LRFRPIMMTT FAALLGALPL MLASGYGAEL RRPLGMTMVG GLLLSQLLTL FTTPVIYLFF
DRLAERWHDR RQRRERTHGA SS
|
|---|
| |