Gene Csal_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1488 
Symbol 
ID4028390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1687428 
End bp1688789 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content67% 
IMG OID637966671 
ProductK+ transporter Trk 
Protein accessionYP_573540 
Protein GI92113612 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCT GGCAACGCCT GTCACGCCCC TGGCGACATA CGCCACACGG CCGCGTACTT 
AGGCTTTCGC CGCCGGAAAC GCTATTGCTG GGCTTTACCC TGCTCTGCCT GATCGGCGGC
GGCTTGTTGC GCCTGCCCAT GGCCGCGACG GTAACGCTCG ACTGGCAGGA GGCGCTGTTC
ACCGCCACCT CGGCGGTGAC GGTCACCGGG CTGGCGGTCG TCGATACCAG CGCTTTCACA
CCGTTCGGCC AGGTCGTGCT GCTGGCCTTG ATCCAGATCG GCGGACTGGG GTTCATGACC
TTCGGGGCTC TGACCCTGCT GCTCCTGGGG GCCCGCCTCC CCCTGCAGCA GCAGAACCTG
GTGCGAGAAG CCCTCGGTGA AACCTCGTTG GGTGAACTCT CGCAACTCGT GCGCCTGGTG
GTAGCCTTCG CCGTCCTGGT CGAGGCAGTG GGGGCGGGAC TTCTCGCGCT GCACTGGGTC
CCCGAGCTCG GCTGGTCGCG CGGTTTGTGG GCCAGCCTGT TTCATGCGGT ATCCGCCTTC
AACAATGCCG GTTTCTCGCT GTGGCCCGAC AGCCTGACGC GCGACGTCGG CACGCCGCTG
GTCACGCTGG TCGTCAGCAG CCTCTTCATC GTCGGCGGCC TGGGTTTCGT GGTGATCAGC
GACATTCGCG AAAAGCGGCG CTGGGGACGG TTCTCCATGC AGACCAAGAT CGTGCTGTGC
GCGACCCTGG CCATCAACCT GGTCGCCATG GCGGCGATGG CGGCACTCGA ATGGCACAAT
CCCGCGACAC TGGGCGGGCT GGAAAGCCTC GGCGACAAGC TGCAGGCGGC CTGGTTCCAG
GCCGTGACAC CGCGTACCGC CGGTTTCAAC AGTGTCGATA CCGCGGCCAT GTCCGACGCC
TCCTCGCTGC TCACCATGCT GCTGATGTTC ATCGGTGGCG GCGCGAGCTC CACCGCCAGC
GGCATCAAGC TCACCACCTT CATCGTGCTG CTGTTGGTTG CCCGGGCCTT CCTGCGCGGC
ACGCAGCCCA CGGCCTACGG GCGCGCCATC GGCGAACAGA CGGTGATGAA GGCCGTCGCC
GTGGCGCTGG CCGGGGTGGC GCTGGTGTTC GTGACGCTGC TGGTGCTGTG CATCACCGAT
GGCCGCCTCG CGTTCCTCGA TCTGGCCTTC GAGAGCGTCT CCGCCTTCGG CACGGTGGGA
TTGTCGCGCG GCATCACCAA TGAACTGTCG CTGCCCGGCC AATGGATGCT GATGCTCACC
ATGCTGCTCG GCCGTGTCGG ACCGCTGTCG CTGGGGTACT TCCTGGCCAC GCGGCGCACG
CGGGGAATGC GCTACGCCGA GGGCCACATC CAGATCGGCT GA
 
Protein sequence
MSFWQRLSRP WRHTPHGRVL RLSPPETLLL GFTLLCLIGG GLLRLPMAAT VTLDWQEALF 
TATSAVTVTG LAVVDTSAFT PFGQVVLLAL IQIGGLGFMT FGALTLLLLG ARLPLQQQNL
VREALGETSL GELSQLVRLV VAFAVLVEAV GAGLLALHWV PELGWSRGLW ASLFHAVSAF
NNAGFSLWPD SLTRDVGTPL VTLVVSSLFI VGGLGFVVIS DIREKRRWGR FSMQTKIVLC
ATLAINLVAM AAMAALEWHN PATLGGLESL GDKLQAAWFQ AVTPRTAGFN SVDTAAMSDA
SSLLTMLLMF IGGGASSTAS GIKLTTFIVL LLVARAFLRG TQPTAYGRAI GEQTVMKAVA
VALAGVALVF VTLLVLCITD GRLAFLDLAF ESVSAFGTVG LSRGITNELS LPGQWMLMLT
MLLGRVGPLS LGYFLATRRT RGMRYAEGHI QIG