Gene Csal_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1473 
Symbol 
ID4028413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1671890 
End bp1672405 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content65% 
IMG OID637966656 
Productanti-sigma-factor antagonist domain-containing protein 
Protein accessionYP_573525 
Protein GI92113597 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.196106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAGG GGCGTATTCA GGCGGCGTTC AACGCCGGTG TATTCGTGCT CAAGCTGAGT 
GGTGACGTGC GTTTGACGCT GTGTGCCACA CTCGATCAGC AGGCGCAGCG CGTGGCCGAC
AGCCCCGGCC TGGCCGCGGT GATGATCGAT CTGCGCGAGG CGACCAATGT CGACTCCACC
GCCCTGGGCT TTCTGGCCAA GGTGGCCATG GCCGTGGAGG GGCGGCTCGA ACAGCCGCCG
ACCATCGTCG CCGAGCATCC CGATGTGCGG CGCATGCTGG ATGTCATGGG GTTTTCGCGT
TACTTCACGT TGCTCGATGC ACCGCTCACC GAGCCGGCGA GCCTGCGCGA GTTGCCGCAG
GTGAGGGCGG ATGAGCAGGG CATGCAGCAG CGCATCCTCG AGGCGCACCG GATTCTGATG
CGCATGAGCG ATCACAATCG CGATGAATTC CAGCCCCTGG TCGATCTGCT CGAAGCGCAG
AAGCCCGGCG AGGATTGCTC CCGGACGCAT CACTGA
 
Protein sequence
MHEGRIQAAF NAGVFVLKLS GDVRLTLCAT LDQQAQRVAD SPGLAAVMID LREATNVDST 
ALGFLAKVAM AVEGRLEQPP TIVAEHPDVR RMLDVMGFSR YFTLLDAPLT EPASLRELPQ
VRADEQGMQQ RILEAHRILM RMSDHNRDEF QPLVDLLEAQ KPGEDCSRTH H