| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1472 |
|---|
| Symbol | |
|---|
| ID | 4028412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1670758 |
|---|
| End bp | 1671897 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637966655 |
|---|
| Product | serine phosphatase |
|---|
| Protein accession | YP_573524 |
|---|
| Protein GI | 92113596 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.95872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACT CTCGTACCCT GATCGGTCTC CTCGACCAGC CCGGCGCATC GCGGGATGCG
CTGGCCGGCC TAATTGGCCA GGGACATTTC GCCGTGCTGG CGGCGGCTCA TGCCGAGGAG
TTGCCTGCGG AGGTGGCCCT GGTGGTGGCG CATGTGCGCG CCGTGCCGCG CCAGGACTGG
GCCGCGCTGG CGGCGCGCTG GCCGACCATC GTGATCAGCG AGACGCGTTT CGACGGCGAT
CTGCTGCAGG CGGTGGATGC CGGGCTGATC GACTATCTGG TCGAGCCGCA GTGTCATGGT
GACGTGCTGC GACGCCTGAT CGGACGCTCG ATCGAGCATC ATCGGCTGGC TCAGGAATAC
GCCCGGGATC GTCAGCGCCT GGCCGAACTC AACGAAAGCC TGGAAACCCA CCTGGCCATG
CTGCGTCTCG ATCAGCAGGC CGGCTGGCAG ATCCAGCGCA AGCTGCTGCC CGCCAATCCC
GTGACGCGCC ACGATGTCAC CGCCGAGTAC TGGCTGGCGC CTTCGCTGTA TCTATCGGGT
GACTTTCTCG ACTTTCAGCG CTGCGATGCG CGTTACAGCT TCTTCTACTT CGTCGACGTC
TCGGGGCACG GGGCGTCGTC GGCGTTCGTC ACCGTACTGC TCAAGTACCT CAGCAACCGC
TGGTTGTCGC AATGGCGCGA GCAAAACGCC AGCGACTTCC CCGCGCAGTG CCTGACCGAG
CTCAATCGTG AGCTGCTGGA GACGGGGATC GGCAAGCATG CCACGGTCTT CGCCGGGGTG
CTTGACCATG AGCGTCACTA TCTCCACTAT TCGCTCGGCG CGCAGATGCC GATGCCGCTC
TTGCAAGTGG GTCGCGAGGT CAGCGTGCTG TCGGGAGAAG GGCCGCCGGT GGGGTTGTTT
CCGCATGTCG AATTCCCCAC TTACGGTTAT GCCTTGCCCG ATGCATTTCG TCTGTGGCTG
TGCTCGGACG GCATACTGGA ATGTCTGGCG GGCGATACCC TCGATCAACG CCTCGTTGCG
TTGAAGGAGC GCGTCGCCCA GTGCGCCCGT GTGGATGCGT TGAAAGATGC ACTCGTATTG
GGCGACGAAC TGCCGGATGA TCTCACCATC ATGACTTTGA GCGGATTCGA TCATGCATGA
|
|---|
| Protein sequence | MANSRTLIGL LDQPGASRDA LAGLIGQGHF AVLAAAHAEE LPAEVALVVA HVRAVPRQDW
AALAARWPTI VISETRFDGD LLQAVDAGLI DYLVEPQCHG DVLRRLIGRS IEHHRLAQEY
ARDRQRLAEL NESLETHLAM LRLDQQAGWQ IQRKLLPANP VTRHDVTAEY WLAPSLYLSG
DFLDFQRCDA RYSFFYFVDV SGHGASSAFV TVLLKYLSNR WLSQWREQNA SDFPAQCLTE
LNRELLETGI GKHATVFAGV LDHERHYLHY SLGAQMPMPL LQVGREVSVL SGEGPPVGLF
PHVEFPTYGY ALPDAFRLWL CSDGILECLA GDTLDQRLVA LKERVAQCAR VDALKDALVL
GDELPDDLTI MTLSGFDHA
|
|---|
| |