| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1469 |
|---|
| Symbol | |
|---|
| ID | 4028409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1664800 |
|---|
| End bp | 1668777 |
|---|
| Gene Length | 3978 bp |
|---|
| Protein Length | 1325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637966652 |
|---|
| Product | ATP-dependent helicase HrpA |
|---|
| Protein accession | YP_573521 |
|---|
| Protein GI | 92113593 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01967] ATP-dependent helicase HrpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACGA CACCGACGAG CGATTCCCGC GATCAACTGG CGCGTCTGCG CGCGCAACTC
GACGACTGCC TGCTGCGCGA TGCCCACGAA CAGGGGCGCC GCCTGGCCAA GCTGAACGGG
CGCGCGCGCA GCGGTAAACC CATCGACCGC TCGTTGCGCG ACATCGAAGC CCGTCTGGCG
CGTTCGCGCG AGCAGCTGGC GGCGCGGCGC GCGCAACCGC TGACGTTGCG CTATCCCGAT
GACCTGCCCG TGGTCGAACG CCGTGAGGAT CTGCTGGCGG CGCTCGACGC TCACCAGGTG
GTCGTGGTCG CTGGCGAGAC CGGCTCGGGC AAGACCACCC AGCTCCCCAA ACTGTGTCTC
GAGCTGGGGC TGGGGCGCCG AGGGCTGATT GGCCACACCC AGCCACGGCG GCTGGCGGCG
CGCACCGTCG CCACACGCCT CGCCGAGGAG CTGGACGTGC CGCTGGGGGC GCAGGTCGGC
TACCAGGTGC GCTTCACCGA CCAGACCGAC GAGCGCACCC TGGTCAAGCT GATGACCGAT
GGCATCCTGC TCGCCGAGAC GCAGAACGAC CCGGATCTGA TGCGCTACGA GGCGATCATC
ATCGACGAGG CGCACGAGCG CAGCCTCAAC ATCGATTTCC TGCTCGGCTA TCTCAAGCGC
CTCACCGAGC GGCGGCCCGA CCTCAAGATC ATCATTACCT CGGCGACCAT CGACGTCGAG
CGTTTCAGCC ACCACTTCGG GCGCGACGGC AAGCCGGCGC CGGTGGTGGA AGTCTCGGGG
CGCACCTATC CGGTGGACGT GTTCTATCGA CCGCTGGTGC GCGATGCGGA CGACGAGGAA
GACCGCACCT TGCAGGAGGG CATTCTGCAT GCGGTGGAAG AAGTCGAGAC CATCGAGCGC
GAGCGACGCT GGTACAGCGG GCCCCGCGAC GTGCTGATCT TCCTGCCCGG CGAGCGGGAA
ATTCGCGAAA CGGCGGACAC GCTGCGCCGT GCCGACCTCA AGGGCACCGA GATCCTGCCG
CTTTATGCGC GGCTCTCCAA TGCCGAGCAG AATCGCGTGT TCCAGCCGCA TGCCGGACGC
CGCATCGTGC TGGCCACCAA CGTGGCGGAA ACCTCGCTGA CCGTGCCGGG CATCCGCTAC
GTGATCGACC CCGGCCTGGT CCGCATGAGC CGCTACAGTT ATCGCGCCAA GGTGCAGCGC
CTGCCCATCG AGCCGATCAG TCAGGCCAGC GCCGACCAGC GCAAGGGGCG TTGCGGGCGC
ATCAGCGAGG GCGTGTGCAT CCGCCTCTAC AGCGAAGAGG ACTTCCTGGC GCGGCCGACG
TATACCGAGC CGGAGATTCA GCGTACCAAC CTGGCTTCGG TGATTCTCTC CATGCTGGCG
CTGAAGCTCG GCGACATCGA GGCTTTCCCC TTCGTCGACG TGCCGGATTC GCGCTTCATC
AAGGACGGTT ATCGTCTGCT CTATGAACTG GGGGCCGTGG GCGCCGACAA TCGCCTGAGC
GAGCTCGGGC GTCGCGTGGC CCGCCTGCCG ATCGACCCGC GCCTGGCACG CATGGCACTC
GCCGGTGCCG AGCAGGGCAG CCTGCGCGAG ACACTGATCG TGGTCAGCGC CTTGTCGACG
CAGGACCCGC GCGACCGTCC GGCGGACAAG CGCCAGGCGG CGGACGAGAA GCATCGCCAG
TGGCAGGACC CCGAGTCGGA CTTCATGGCC TGGCTCAATC TCTGGCATGG GGTCGAGCAG
GCCCGCGAGA CCCTCTCCGG CAACCAGCTG CGGCGCTGGT GCCGTGACAA CTATCTCAGC
TACCTGCGGC TGCGGGAGTG GCATGACACC TTCCGCCAGC TCAAGCAACT GACGCGTGAC
ATGGGACTCG AGCCCTCCAG CGCGGTATTG CCGCCCAAGG AGGACGACGC TGCGTCGGCG
CGTCCGCGCG TCGATGGCGA GCGCTTGCAC AAGGCGCTGT TGTCGGGGCT GCTCTCGCAC
CTGGGCACGC TGCAGGAAAA CCGCGAATAC CTCGGCGCGC ACAACCGCAA GTTCATGATT
CATCCCGGCT CGGGGCTGGC CAAAAAGACG CCCAAGTGGG TCATGGCCGG CGAGCTGGTG
GAAACCTCGC GCCTTTATGC GCGCGACGTG GCGCGCATCC AGCCGGCATG GGTAGAGCCC
ATGGCGTCGC ATCTGGTCAA GCGCAGCTAC AGCGAACCGC ACTGGGAGAT GAAGCGTGGC
CAGGTCGTGG CGTTCGAGCA GGTGACGTTG TTCGGTCTGC CGATCGTCAC CGGGCGGCGC
ATCGACTACG CCAAGGTGGC GCCGGAAGAA GCCCGGGAGC TTTTCATCCG GCGTGCGCTG
GTGGAAGGGG AGTACCGCAC CCAGGCGGCC TTCTTCCAGC ACAATCGTGC CCTGATCGAC
GACGTGGAAG AACTCGAGGA TCGTGTCCGC AAGCGCGATA TCCTGGTCGA CGAGGAGACG
CTGTTCGCCT TCTACGATGC CCGGCTGCCG GCGGACGTGG CCGGCGCGCG CAGCTTCGAG
CGCTGGCGCA AGCAAGCCGA ACGAGAAGCG CCCGAGGTGC TCAAGCTCGA GCGTGCCACC
CTGATGGCGC GCGATGCCGA GGAAGTCACC CAGCAGGCCT ATCCCGACGA GCTGGTGCAC
AACGGCGTGC GCTATCCGCT GGATTATCAT TTCGCACCGG GCGAGTCCGA CGATGGCGTG
ACGCTGACGG TACCGGCCGC CATGCTGTCG CAGCTGCCCG AAGGACGGCT CGAGTGGCTG
GTGCCGGGGC TGTTGCGAGA GAAATGCATC GCACTGCTCA AGACGTTGCC CAAGGCGATC
CGTCGGCAGG TGGTGCCGAT TCCCGATTGG GTGGATGCGG CCCTGGCCAC CCTGGTGCCC
GACGAGCGCC CGTTGACCGA GGCCCTGGGC GAGTTCCTGC GCCGGCGCAC GGGGGTGCGC
CTGAGCGCCG ACGATTGGCG CACGGATCAG CTCGAGCCGC ACCTGATCAT GAACCTGCGC
GTGGTGGCGC ACGATGGCGA GGTGCTTGGC GAAGGGCGCG ACCTCGGTGC CCTCAAGCAG
CGCTTCGACG AAGCGGCCAG CCAGGGTGCC AGGGCGCTGG CGGCGAGCGG TCCGACGGCG
GAGGCGCTGG CCGAGCTGCC GGAGCAGGCG ATTCCCGAAT CGCGCTCCAC CCAGCAGGCG
GGCATTCGCG TCGAGGCCTA CCCGGCGCTG GTCGACCGAG GTGACAGCCT GGCCATCGAG
TCGTTCGATC ATCCCGACAA GGCGCATGCC GCGCACCGCC ATGGCGTCAA GCGTGCGGCC
ATGCTGCGCC TGCCCGAGCA GGTTCGTTAC CTGTCGCGCG AACTCAAGGG ACTGGATCGC
TGCGCGTTGC TGTTCGCCAA GGTGGGGAGC AAGACGCAGC TCGTCGACGA TCTGGTCGAG
GCGGTGTTCC TGCAGGTCGT TGCCGTGGAC CCGTTGCCGC GTGACCGCCA GTCCCTGGAA
GCGCGCATCG AGGCCACGCG GAGCGAGCTG GTGGCGCACG CCGAGGAGCG GGTCGCGACC
CTGCAGAAAG CGCTGGAAGG GCATCTCGAG GTCACCAAGG CCCTCAAGGG CAACCTGAAC
CTGTCCCTCG CCCTGGTCTA CAGTGATTTG AAGGCCCAGA TGGCGCGCCT GGTCTATCCC
GGCTTCGTCA GCGATGCCGA GGAATGGCTC GAGCAGTATC CGCGCTACAT GCAGGCGGCG
TTGATCCGGC TCGAGAAGGC CCCGCGCGAG CGGTCCCGCG ATCAAATGGC GATGCAGCAG
GTGCATGCGT TCGAAGAGCG GTTGCGCGCG CGCCTCGAGG CCGATCAGCG TGAAGGGCGG
CGTGACCCGC GCTTCGTCGA GTTCGGCTGG TGGCTGGAAG AGTTGCGTGT CTCGCTGTTT
GCCCAGCAAC TGGGCACGCT GGCGCCGGTC TCGGCCAAGC GCCTGGAGCG TCGCTGGACG
GAACTCACGG GACGGTGA
|
|---|
| Protein sequence | MSTTPTSDSR DQLARLRAQL DDCLLRDAHE QGRRLAKLNG RARSGKPIDR SLRDIEARLA
RSREQLAARR AQPLTLRYPD DLPVVERRED LLAALDAHQV VVVAGETGSG KTTQLPKLCL
ELGLGRRGLI GHTQPRRLAA RTVATRLAEE LDVPLGAQVG YQVRFTDQTD ERTLVKLMTD
GILLAETQND PDLMRYEAII IDEAHERSLN IDFLLGYLKR LTERRPDLKI IITSATIDVE
RFSHHFGRDG KPAPVVEVSG RTYPVDVFYR PLVRDADDEE DRTLQEGILH AVEEVETIER
ERRWYSGPRD VLIFLPGERE IRETADTLRR ADLKGTEILP LYARLSNAEQ NRVFQPHAGR
RIVLATNVAE TSLTVPGIRY VIDPGLVRMS RYSYRAKVQR LPIEPISQAS ADQRKGRCGR
ISEGVCIRLY SEEDFLARPT YTEPEIQRTN LASVILSMLA LKLGDIEAFP FVDVPDSRFI
KDGYRLLYEL GAVGADNRLS ELGRRVARLP IDPRLARMAL AGAEQGSLRE TLIVVSALST
QDPRDRPADK RQAADEKHRQ WQDPESDFMA WLNLWHGVEQ ARETLSGNQL RRWCRDNYLS
YLRLREWHDT FRQLKQLTRD MGLEPSSAVL PPKEDDAASA RPRVDGERLH KALLSGLLSH
LGTLQENREY LGAHNRKFMI HPGSGLAKKT PKWVMAGELV ETSRLYARDV ARIQPAWVEP
MASHLVKRSY SEPHWEMKRG QVVAFEQVTL FGLPIVTGRR IDYAKVAPEE ARELFIRRAL
VEGEYRTQAA FFQHNRALID DVEELEDRVR KRDILVDEET LFAFYDARLP ADVAGARSFE
RWRKQAEREA PEVLKLERAT LMARDAEEVT QQAYPDELVH NGVRYPLDYH FAPGESDDGV
TLTVPAAMLS QLPEGRLEWL VPGLLREKCI ALLKTLPKAI RRQVVPIPDW VDAALATLVP
DERPLTEALG EFLRRRTGVR LSADDWRTDQ LEPHLIMNLR VVAHDGEVLG EGRDLGALKQ
RFDEAASQGA RALAASGPTA EALAELPEQA IPESRSTQQA GIRVEAYPAL VDRGDSLAIE
SFDHPDKAHA AHRHGVKRAA MLRLPEQVRY LSRELKGLDR CALLFAKVGS KTQLVDDLVE
AVFLQVVAVD PLPRDRQSLE ARIEATRSEL VAHAEERVAT LQKALEGHLE VTKALKGNLN
LSLALVYSDL KAQMARLVYP GFVSDAEEWL EQYPRYMQAA LIRLEKAPRE RSRDQMAMQQ
VHAFEERLRA RLEADQREGR RDPRFVEFGW WLEELRVSLF AQQLGTLAPV SAKRLERRWT
ELTGR
|
|---|
| |