| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1468 |
|---|
| Symbol | |
|---|
| ID | 4028408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1663027 |
|---|
| End bp | 1664718 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637966651 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_573520 |
|---|
| Protein GI | 92113592 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACG CCATGTCGCC GGTCGTTTCC GGTCCGCCTC TCGAAGGAAT GGATGAGTTC
TCCTCCGTCA ACGAGGTATT CGCCGAGGCG TGCCGGCGCT TTGCCGACAA GCCGGCCTTC
ACGTGCATGG GGCGAACGCT GCGCTATGCG GAACTCGAGC GTTTGTCGCG GGATTTCGCG
GCCTGGCTCA GTCACGAGAC CGATCTCGAG CCGGGCGACC GGATCGCCAT TCAGTTGCCC
AACGTGCTGC AATTTCCGGT GGCGATATTC GGCGCCATGC GGGCGGGGCT GGTGGTGGTC
AACACCAATC CGCTGTATAC CGAACGGGAA ATGGCGCACC AATTTCAGGA TGCGGGCGTC
AAGGCCATTC TGATTCTCGC CAACATGGCC GACAAGCTCG AGCGCATTCT TCCCCGGACC
GATATTCGTC ATGTCCTGGT CACCGAGCTC GGCGACATGC ACGGCTTCCC CAAGGGCGCG
CTGATCAATG CCGCCGTCAA GCACGTCAAG AAGATGGTAC CGCGGTATTC ATTGCCCGAT
GCCATCGGAT TCCGCACGGC CTTGTCGCAG GGCCATGGCC GGACCAGCGA GGCCGTGACG
TGCCACGGCG ACGACATTGC CGTGTTGCAA TACACCGGCG GCACCACGGG GGTGGCCAAG
GGCAGCATGC TCACGCATCG CAACTTGATC GCCAACATGC TGCAGACCCG GCAGATGATC
GCCGGACTGA TCGAGGAAGG CCGCGAGACG ATCATCGCAC CGTTGCCCGT CTACCATATC
TATACGTTCA CGGTGAATTG CCTGTTCACC ATGGTGACGG GGAACCATAC CGTACTGATC
CCCAATCCCC GCGATATCGA CGGCTTCATC AAGACGTTGC GCAAGACCGA GTACACCGGT
TTCGTGGGGC TCAACACGCT CTTCAACGCG CTCTGTCAGC GCGAGGATTT CCGAGCGCTG
GATTTCTCGC GCCTCAAGCT GACCATTTCC GGCGGCATGG CGCTGACCAA GGCCGTCGCC
AAGCGCTGGG AGGAAGTCAC CGGCTGCGCG GTGCTGGAAG GCTACGGGAT GACCGAAACC
TCGCCCATCG TGTGCGTCAA CCCGCCGGAC GGCATCCAAC TGGGCACCAT CGGCAAGCCT
GTGCCCGGCA CCTCGATCAA GGTGATCGGC CCCGAGGGCG AGGACGTGCC GCGGGGTGAG
CCGGGCGAGC TTTGCGTCAA GGGGCCTCAG GTGATGAAGG GCTATTGGCA GCGACCCGAA
GACACCGCCA GGGCAATGGA TGACGAGGGC TGGATTCGTA CCGGCGATAT CGCCGTGATC
CAGGAGGACG ATTACGTGCG TATCGTCGAT CGCAAGAAGG ACATGATCAT CGTCTCCGGC
TTCAACGTCT ATCCCAACGA AGTCGAGGAT GTGGTGGCCG CCCACGAGGA CGTGGTCGAA
GTCGCGGCCA TCGGCGTGTC CGATGACGCC ACGGGCGAGG CGATCAAGCT CTTCGTGGTG
AGCCGCAACG AGGCGCTGGA CGCCGAAACG CTGCGCGGCT GGTGCAAGCG CGAACTGTCG
GCCTACAAGG TGCCCAAGCT CATCGAGTTC CGCGACGAGT TGCCCAAGAC CAACGTCGGC
AAGGTGCTGC GTCGCGAATT GCGCGACTCG CAAGGTGCCC AGGCGCAGGT ATCCGAGCAG
GATACGACAT AG
|
|---|
| Protein sequence | MSHAMSPVVS GPPLEGMDEF SSVNEVFAEA CRRFADKPAF TCMGRTLRYA ELERLSRDFA
AWLSHETDLE PGDRIAIQLP NVLQFPVAIF GAMRAGLVVV NTNPLYTERE MAHQFQDAGV
KAILILANMA DKLERILPRT DIRHVLVTEL GDMHGFPKGA LINAAVKHVK KMVPRYSLPD
AIGFRTALSQ GHGRTSEAVT CHGDDIAVLQ YTGGTTGVAK GSMLTHRNLI ANMLQTRQMI
AGLIEEGRET IIAPLPVYHI YTFTVNCLFT MVTGNHTVLI PNPRDIDGFI KTLRKTEYTG
FVGLNTLFNA LCQREDFRAL DFSRLKLTIS GGMALTKAVA KRWEEVTGCA VLEGYGMTET
SPIVCVNPPD GIQLGTIGKP VPGTSIKVIG PEGEDVPRGE PGELCVKGPQ VMKGYWQRPE
DTARAMDDEG WIRTGDIAVI QEDDYVRIVD RKKDMIIVSG FNVYPNEVED VVAAHEDVVE
VAAIGVSDDA TGEAIKLFVV SRNEALDAET LRGWCKRELS AYKVPKLIEF RDELPKTNVG
KVLRRELRDS QGAQAQVSEQ DTT
|
|---|
| |