Gene Csal_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1458 
Symbol 
ID4029172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1652042 
End bp1654213 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content70% 
IMG OID637966641 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_573510 
Protein GI92113582 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTACC AGGTTCTGGC CCGTAAATGG CGCCCGCGCA CGTTTCATGA ACTGGTCGGC 
CAGGAGCACG TCTCGCGCGC GCTGGTCAAC GCGCTCGATC AGGGGCGTCT TCACCATGCC
TATCTGTTCA CCGGCACGCG CGGCGTCGGC AAGACGACGC TGGCGCGGAT TCTCGCCAAG
TGCCTGAACT GCCGGCAGGG CGTGACCTCG GTGCCGTGCG GTGAGTGCGA AACCTGCCGG
GAGATCGACG AGGGGCGTTT CGTCGACCTG ATCGAGGTCG ATGCCGCCTC CCGCACCAAG
GTCGAGGATA CCCGCGAGCT GCTCGACAAC GTGCAGTACG CGCCGACCCA GGGACGCTAC
AAGGTGTACC TCATCGACGA GGTGCACATG CTTTCCACGC ACAGTTTCAA CGCACTGCTC
AAGACGCTCG AAGAGCCGCC GCCCCACGTC AAGTTCCTGC TGGCGACCAC CGATCCGCAG
AAACTGCCGG TGACGGTGCT TTCGCGTTGC CTGCAGTTCA CGCTCAAGAA CATGCCGCCC
GAGCGCGTGG TGGGGCATCT GTCGCATATT CTGCAGGCCG AGTCGGTGGC CTACGACGAG
CAGGCCTTGT GGCTGCTCGG CAAGGCGGCC GATGGGTCGA TGCGCGATGC CATGAGCCTG
ACCGACCAGG CCATCGCCTT TGGGCAGGGC GAGGTGCGTC ATGCCGATGT CGCCGCGATG
CTGGGCACGC TGGATCACCG CCATCTGCTG GCGCTGGCCG AGGCGCTGGC CGAGGTCGAT
GCCGCGCGCG TGCTGCAGGA GGTCGCCAGC CTGGCCGAAC AAGGGCCGGA TTTCGGCGGC
ATTCTCGATG ACCTGGCGGG CATCTTCCAC CGCCTGGCGA TCGCCCAGAT GGTGCCGGAT
GCGCTGGACA ACGGCCACGG CGACCGCGAT ACCCTGCTGC CCCTTGCCGC GCGCTTCACC
GCGGAGGACG TGCAGCTCTA CTACCAGATT GCCCTGCAGG GACGCGGCGA CATGGAAAGC
GCGCCGGACC CGCGCACCGC GCTGGAAATG ACGCTGCTGC GCATGCTGGC GTTCCGCCCC
CAGGGCGTGC CCAAGCCGCC GCAGACGCCG TTGCCGATTC GTGGCGCGGC GGAAGGCCAG
GCCACAGCGA GCACCCCAAC GGCGGACGCG CCCGGCCAGC TCGCGGCGGC GCCGAGCCAG
CCGTCGCCTG CCGACACGCC GCCGCCCGCT GCCGATGCCG CGCCGGCCCA CCCGCCGTCG
CGTCCCGATA CCCAGGCTCC CGTCGCCGAG GAAGAACATG GCGCCGCGGC AGGCGCCGAT
GCATCGTCTG CGTCGCCCGC AGACGAGCCA GCCGCCCCGG GGACGTTGGA ATCCGAGTCG
TTCGCAACGC AGGCATTTGA CAACGAGCCG CTGGAAAGCG CACCGCCTGA CATCGAATCG
GCCGTTGCCG CTCCCCCCGA GCCTGCCGCG CCGGTGACGG AGGCGGTGCC GCCCGTGGCC
GACGCCCAGG CGACCGCCGC CGAGGACGCG CTCGAGGACG CGCTCGAGGA CGAGGCGCAG
CGCCAGGCGG ATGCCGATGG CGCCGTCGAC GTGGACGACG CGCCCCCCTG GGTGCTCGAC
GATGCCCAGA TGCCCGCCGA CGAAATATCG GCTCCTCCCG AGCCGCCGAG CGCGCCCGAC
GCGCCGGCCA CGGAGGTTGC CGAGGATGCC GACGCCCCGG CGCCCACGGC ACAGGCGCCT
GCCGTCGCCA CGCCCGACAC CGGGGCGTTC GATCATGCCC GCTGGCTGGC CAGCTTCGCG
TCGCTGGGAC TGGGCGGGCT GACACGCAAC CTGGCGGCGC ATTGCATCGT CGAGGAGGAC
GACGGCGATA CCTTGACGTT GCGTCTGGAC CCGTCGCAGT CGGCGATGCT GGCGGACGTG
CACGTCGAGC GCATGACCAA GGCGCTGGCC GAGCAGGGCG TGGCCCGACG CTTGCACGTC
ACGGTGGCGG CGATTCCCGA GGGCTGGGAA ACGCCGCGTG CGCAAGGCGA GCGGCTGGCG
CAGGCACGTC ATGCCCAGGC GGTTGAAGCC CTGCGTCGCG ACCCGCATAT TCAGATGCTG
GAACAGGATT TCGGCGCTCA GCTGCTCGAG CGCAGCGTCA CGCCGAGCGA CGAGGCCGCC
GCCCGGCGGT AG
 
Protein sequence
MSYQVLARKW RPRTFHELVG QEHVSRALVN ALDQGRLHHA YLFTGTRGVG KTTLARILAK 
CLNCRQGVTS VPCGECETCR EIDEGRFVDL IEVDAASRTK VEDTRELLDN VQYAPTQGRY
KVYLIDEVHM LSTHSFNALL KTLEEPPPHV KFLLATTDPQ KLPVTVLSRC LQFTLKNMPP
ERVVGHLSHI LQAESVAYDE QALWLLGKAA DGSMRDAMSL TDQAIAFGQG EVRHADVAAM
LGTLDHRHLL ALAEALAEVD AARVLQEVAS LAEQGPDFGG ILDDLAGIFH RLAIAQMVPD
ALDNGHGDRD TLLPLAARFT AEDVQLYYQI ALQGRGDMES APDPRTALEM TLLRMLAFRP
QGVPKPPQTP LPIRGAAEGQ ATASTPTADA PGQLAAAPSQ PSPADTPPPA ADAAPAHPPS
RPDTQAPVAE EEHGAAAGAD ASSASPADEP AAPGTLESES FATQAFDNEP LESAPPDIES
AVAAPPEPAA PVTEAVPPVA DAQATAAEDA LEDALEDEAQ RQADADGAVD VDDAPPWVLD
DAQMPADEIS APPEPPSAPD APATEVAEDA DAPAPTAQAP AVATPDTGAF DHARWLASFA
SLGLGGLTRN LAAHCIVEED DGDTLTLRLD PSQSAMLADV HVERMTKALA EQGVARRLHV
TVAAIPEGWE TPRAQGERLA QARHAQAVEA LRRDPHIQML EQDFGAQLLE RSVTPSDEAA
ARR