Gene Csal_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1448 
Symbol 
ID4027961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1640417 
End bp1641178 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID637966631 
Producthemolysin A 
Protein accessionYP_573500 
Protein GI92113572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.948802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCC TCGATCAACT GCTGGTCATC CAAGGATGGG CGCGTTCACG TACCCGGGCG 
CAGCGCTTGA TTCGCCACGG CCGTGTCACG CTGGTGTCCA CGCAGACGCC ACGCGTACTG
ACCAAGCCCG GCGAAACGTT GCCCGACACC AGTCGTTTCG CGGTCGCCGA GGACCCGGAG
GAGCGCTATG TCTCACGAGC GGGGCTCAAG CTGGAAGGCG TTCTGGAGGC GCTCAACGTA
CGTTTCGACG GCATGACGGT ACTCGACGTG GGCCAGTCCA CCGGCGGCTT CACGGACTGC
GCGATGCGCT TCGGCGCCGC GCGCGTGGTC GGTATCGAGG TCGGACACGA CCAGCTCGCC
CCGACACTGC GTGAGGATGC CCGGGTCACC TGCCTGGAAG GCGTCAACGC CCGCGCTCTG
CCTCGCGAGC GGCTCGACGC GCTCGCCCCC GAAGGACTGC ACGCCGCGGT CATGGATGTC
TCGTTCATCT CGCAGACGCT GATCCTGCCC GAGCTGGCCG CCGTGCTGGC GCCCGGGGGC
CAGTTGATCT CGCTGGTCAA GCCACAGTTC GAGGTCGGCC CGGGCAAGGT CGACGCCCAT
GGCGTCGTCC GCGATCCGGC GCTCTTCGCG GACGTCGAGG CGCGCATTCG CACCTGCTGT
GCCGATGCCG GCTTCGCGAT TCGTCACTGG CAGGAAAGCC CTCTGCGCGG CGGCGACGGC
AACCGCGAGT TCCTGCTTCA CGCGGTCATC CCCCGCCCCT AG
 
Protein sequence
MPRLDQLLVI QGWARSRTRA QRLIRHGRVT LVSTQTPRVL TKPGETLPDT SRFAVAEDPE 
ERYVSRAGLK LEGVLEALNV RFDGMTVLDV GQSTGGFTDC AMRFGAARVV GIEVGHDQLA
PTLREDARVT CLEGVNARAL PRERLDALAP EGLHAAVMDV SFISQTLILP ELAAVLAPGG
QLISLVKPQF EVGPGKVDAH GVVRDPALFA DVEARIRTCC ADAGFAIRHW QESPLRGGDG
NREFLLHAVI PRP