| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1434 |
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| Symbol | |
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| ID | 4027947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1623273 |
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| End bp | 1624289 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637966618 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_573487 |
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| Protein GI | 92113559 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA CGATTGCAGT ACTGAAGGGG GATGGCATAG GCCCCGAAAT CATGGAGGCG
ACACTCAGCG TCCTGAATGC ACTGGACTGT GGCCTGCAAT ATGAATTTCT GGATGCCGGG
CTGACTGCGC AGGAAACGCA TGGACAGCCA ATGCCCGCTG AGACGATCGC AGCGATAAGA
AAGCACCGCA TAGCACTGAA AGGCCCCTTG ACGACGCCGA TCGGTAGCGG AATATCGTCC
CTGAATGTCC AGCTGCGCCG TGAATTCGAT CTTTATGCCA ATGTTCGCCC AGCGATCAGT
TTCCCTGGTA CTCGCTCACG CTATGACAAT ATTGACCTGA TCACGGTACG CGAGAATACC
GAGGGTGCGT ATCTCTCCGA CGGGCAGAGC CTCTCCGATG ATGGCGAGAC GGCATTCTCC
AGCATCCGAG TGACTCGCCG GGGATCGGAG CGCATCGTGC GCCATGCCTT CGAACTGGCA
CATCAACGCA ATCGGAAAAA AGTCACGGCC GTTCACAAGG CCAACATCAT CAAGACCAGT
TCCGGACTTT TCCTCGATGT CGCCCGTGAG GTAGCGAAAG AATATCCGGA CATCGAGTTC
CAGGAAATGA TTGTCGATAA CGCCTGTATG CAGCTGGTGA TGAACCCTCA CCAGTTCGAC
GTTATCGTCA CGACCAACCT TTTTGGCGAC ATCCTCTCGG ATCTCTGTGC CGGGCTGATC
GGCGGCCTGG GGCTGGCACC GGGCGCGAAC ATTGGCACAG AAGCCGCTAT TTTCGAGGCG
GTGCATGGCT CGGCGCCGGA TATCGCCGGG CAAAAGCTCG CCAATCCATG TGCACTGCTA
TTGGCCGCTG CGGATATGCT CGATCACTTG GGCATGGTGG ATAAAGGAGC CCGGATTCGT
CGAACGATCC GGACGGTGCT GGAAACGGCT CGAGATCGAG TGACACCTGA CATGGGCGGA
ACCGGGACTA CCGATACCTT TGCCGAGGCT TTGGTCGCCC ACCTGCATGA CCGATAA
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| Protein sequence | MSQTIAVLKG DGIGPEIMEA TLSVLNALDC GLQYEFLDAG LTAQETHGQP MPAETIAAIR
KHRIALKGPL TTPIGSGISS LNVQLRREFD LYANVRPAIS FPGTRSRYDN IDLITVRENT
EGAYLSDGQS LSDDGETAFS SIRVTRRGSE RIVRHAFELA HQRNRKKVTA VHKANIIKTS
SGLFLDVARE VAKEYPDIEF QEMIVDNACM QLVMNPHQFD VIVTTNLFGD ILSDLCAGLI
GGLGLAPGAN IGTEAAIFEA VHGSAPDIAG QKLANPCALL LAAADMLDHL GMVDKGARIR
RTIRTVLETA RDRVTPDMGG TGTTDTFAEA LVAHLHDR
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